DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP012425

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_320129.3 Gene:AgaP_AGAP012425 / 1280456 VectorBaseID:AGAP012425 Length:472 Species:Anopheles gambiae


Alignment Length:328 Identity:94/328 - (28%)
Similarity:143/328 - (43%) Gaps:72/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 QGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLT 312
            :|:...||.|: |..|..|:     ..|.|.|..|:..|.:.:.|    ||:.:           
Mosquito    26 KGVFDCTSKQI-GATLFPLE-----DWQSLNTNGLDAKLVFLVST----GLKEI----------- 69

  Fly   313 IINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLS---------- 367
                ..||.| |:..|.|..|:|..:..|...|||.|:||:|..|.:.|  |.|:          
Mosquito    70 ----THFPSM-NVTWLDLSHNEIATMKTGCFANLTLLQVLDLSHNRLKS--ESLNPDVFAGHYST 127

  Fly   368 ----KLSQLQELSITSNRLRWIND---TELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSD 425
                .||:|:.|.:.:|.|..:|.   ..|| :::.|.:..||...|...:...::.:.:|:..|
Mosquito   128 NEYMPLSKLRVLRLGANDLHSLNPDLFEHLP-ALEELSLELNPFKVIDQQSEIAIASIERLVSLD 191

  Fly   426 VRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPR-LKSLELKTNSLKRIP-NLSSCRDLR 488
            :    |:.|||                ::|..|. .||| |:.|.|..|.|:.:| .||....|.
Mosquito   192 L----SYMELE----------------DIPKYLF-HTPRGLRYLNLTGNLLQEVPAALSYATALA 235

  Fly   489 LLDLSSNQIEKI-QGKPFNGLKQLNDLLLSY-NRIKALPQDAFQGIPKLQLLDLEGN-EISYIHK 550
            .|.|..|.|..| .|..|..||||..|.||| :::|.:.:.||.|:..||.:.:..| .::|:|.
Mosquito   236 WLSLDENPISSIVVGTEFPSLKQLTFLSLSYMSQLKVIGRGAFSGLESLQEVHITNNPHLTYLHG 300

  Fly   551 EAF 553
            .||
Mosquito   301 HAF 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064 40/148 (27%)
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566 5/14 (36%)
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380 1/3 (33%)
LRR_8 252..311 CDD:290566 14/58 (24%)
leucine-rich repeat 253..276 CDD:275380 6/22 (27%)
leucine-rich repeat 277..300 CDD:275380 7/22 (32%)
LRR_8 299..359 CDD:290566 17/59 (29%)
leucine-rich repeat 301..324 CDD:275380 3/22 (14%)
leucine-rich repeat 325..348 CDD:275380 7/22 (32%)
LRR_RI 327..567 CDD:238064 75/249 (30%)
leucine-rich repeat 349..371 CDD:275380 9/35 (26%)
LRR_8 370..425 CDD:290566 13/57 (23%)
leucine-rich repeat 372..393 CDD:275380 7/23 (30%)
leucine-rich repeat 394..415 CDD:275380 4/20 (20%)
leucine-rich repeat 418..486 CDD:275380 19/69 (28%)
leucine-rich repeat 441..464 CDD:275378 3/22 (14%)
LRR_8 487..545 CDD:290566 23/60 (38%)
leucine-rich repeat 487..510 CDD:275380 9/23 (39%)
leucine-rich repeat 511..534 CDD:275380 9/23 (39%)
LRR_8 533..589 CDD:290566 7/22 (32%)
leucine-rich repeat 535..558 CDD:275380 7/20 (35%)
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP012425XP_320129.3 LRR_RI <55..267 CDD:238064 71/255 (28%)
LRR_8 76..146 CDD:290566 22/71 (31%)
leucine-rich repeat 77..100 CDD:275380 7/22 (32%)
leucine-rich repeat 101..135 CDD:275380 9/35 (26%)
LRR_8 134..194 CDD:290566 14/64 (22%)
leucine-rich repeat 136..159 CDD:275380 7/23 (30%)
leucine-rich repeat 160..186 CDD:275380 4/25 (16%)
LRR_8 186..244 CDD:290566 23/78 (29%)
leucine-rich repeat 187..210 CDD:275380 10/43 (23%)
leucine-rich repeat 211..233 CDD:275380 8/21 (38%)
leucine-rich repeat 234..258 CDD:275380 9/23 (39%)
LRR_8 257..329 CDD:290566 18/47 (38%)
leucine-rich repeat 259..283 CDD:275380 9/23 (39%)
leucine-rich repeat 284..305 CDD:275380 7/20 (35%)
leucine-rich repeat 343..355 CDD:275378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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