DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rk and AgaP_AGAP003994

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_318447.2 Gene:AgaP_AGAP003994 / 1278814 VectorBaseID:AGAP003994 Length:370 Species:Anopheles gambiae


Alignment Length:287 Identity:73/287 - (25%)
Similarity:121/287 - (42%) Gaps:37/287 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 NNNLTK----------LEANSFFMAPNLEELTLSDNSI--INMDPNAFYGLAKLKRLSLQNCGLK 240
            ||.|.|          ....:..|...:|:|.|.||.:  :.:||.|.|   .::.|.||...|:
Mosquito    85 NNQLFKAGVLRVFARGTRVTTLTMPSTIEQLYLRDNGLRTVEIDPRARY---IVRYLRLQMNKLR 146

  Fly   241 SLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTN-ALAGLRTLEAL 304
            |:  ..|:.|.||..|.|..|.:..:..|....:..||.|.|.||....:.|. .:..|..|..|
Mosquito   147 SI--AHFEHLTQLHELNLCDNLIEGVPLDTFATMPALRQLILCGNHIKTLGTTPTVIQLPALTHL 209

  Fly   305 NLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGAL-KNLTALKVLELDDNLIS--SLPEGL 366
            :||.|.|..:..|.: ::|.||.|.::.|.:..:.:|.| :....|::|:...|.:.  |..:.|
Mosquito   210 DLGGNFLASLPLERW-QLPQLINLSVRDNLLTTLDSGLLVRRFPLLRILDASANALDCHSYHQAL 273

  Fly   367 SKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRS 431
            ........:.:...|:..::|..:..:.:|  .|.|   .|.|.|..|...|      :||.|:.
Mosquito   274 QTFVNRSVVHLIDRRMCSVDDAIVLDAEEM--RRPN---GIKPAAAEGNGPL------EVRHLKE 327

  Fly   432 FPELEACHALEILKLDRAGIQEVPANL 458
            ...|:.    ..::..|..|:::.|||
Mosquito   328 RIFLQQ----RTIQQQRMEIEQLRANL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064 55/210 (26%)
leucine-rich repeat 183..204 CDD:275380 5/25 (20%)
LRR_8 203..263 CDD:290566 21/61 (34%)
leucine-rich repeat 205..228 CDD:275380 9/24 (38%)
leucine-rich repeat 229..252 CDD:275380 7/22 (32%)
LRR_8 252..311 CDD:290566 19/59 (32%)
leucine-rich repeat 253..276 CDD:275380 5/22 (23%)
leucine-rich repeat 277..300 CDD:275380 8/23 (35%)
LRR_8 299..359 CDD:290566 17/60 (28%)
leucine-rich repeat 301..324 CDD:275380 7/22 (32%)
leucine-rich repeat 325..348 CDD:275380 6/23 (26%)
LRR_RI 327..567 CDD:238064 28/135 (21%)
leucine-rich repeat 349..371 CDD:275380 5/23 (22%)
LRR_8 370..425 CDD:290566 10/54 (19%)
leucine-rich repeat 372..393 CDD:275380 2/20 (10%)
leucine-rich repeat 394..415 CDD:275380 6/20 (30%)
leucine-rich repeat 418..486 CDD:275380 10/41 (24%)
leucine-rich repeat 441..464 CDD:275378 5/18 (28%)
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP003994XP_318447.2 LRR_RI <106..264 CDD:238064 48/163 (29%)
leucine-rich repeat 113..129 CDD:275380 5/15 (33%)
leucine-rich repeat 135..156 CDD:275378 7/22 (32%)
LRR_4 136..168 CDD:289563 12/33 (36%)
LRR_8 155..214 CDD:290566 18/58 (31%)
leucine-rich repeat 157..180 CDD:275378 5/22 (23%)
LRR_4 179..220 CDD:289563 14/40 (35%)
leucine-rich repeat 181..205 CDD:275378 8/23 (35%)
LRR_8 204..264 CDD:290566 17/60 (28%)
leucine-rich repeat 206..228 CDD:275378 7/22 (32%)
leucine-rich repeat 229..242 CDD:275378 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.