DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP008173

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_317291.3 Gene:AgaP_AGAP008173 / 1277793 VectorBaseID:AGAP008173 Length:344 Species:Anopheles gambiae


Alignment Length:377 Identity:91/377 - (24%)
Similarity:148/377 - (39%) Gaps:108/377 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 LEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGL-----KSLPPQSFQGLAQLTSLQLNGNALV 264
            :|:||.|..            |..|...|..:.|:     ..|||::      ::|.|...|.|:
Mosquito    32 IEQLTTSQQ------------LHDLATYSFGDAGMIKLIDSRLPPEA------ISSFQPIVNYLI 78

  Fly   265 SLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNL------------GSNL--LTIIN 315
                     |::.||..|      .:|.|.     ||::::|            .:.|  |::.|
Mosquito    79 ---------LERCRTDHL------ILPPNC-----TLQSISLIQTSIHRLEVFHNTQLYYLSVTN 123

  Fly   316 DEDFPRMPNLI------VLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLSKLSQLQE 374
            .|....:|:|.      .:.|.:..|...|...|:|:..|.|:||..|             ::::
Mosquito   124 SEISSLLPSLYNLTALETIRLWQMHIPVFSFDVLRNMEKLNVIELSYN-------------RIEQ 175

  Fly   375 LSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELEACH 439
            |.:.||       ....|::.:||:..|.||||.......|..|..|.||.......:..|...|
Mosquito   176 LQLASN-------ATCCRNLSLLDLSFNRLSTIDCALISSMQALTVLQLSSNVIQELYGSLHLPH 233

  Fly   440 ALEILKLDRAGIQEVPANLCR-QTPRLKSLELKTNSLKRIPNLSSC----RDLRLLDLSSNQIEK 499
            ..| |.|....|:.:  :||| ||..||.|.:..|   ||.:|..|    ::|....::.|.:.:
Mosquito   234 LTE-LDLSNNRIKSI--DLCRWQTGSLKGLNVVNN---RIEHLFDCLGQLQNLMTFQIADNALTQ 292

  Fly   500 IQGKPF--NGLKQLNDLLLSYNRIKALPQDAFQGIPKLQL----LDLEGNEI 545
            :...||  :.|..||   .|:|||:.:     :....|:|    :.|:||.:
Mosquito   293 LDLAPFTQSRLVLLN---FSHNRIEVI-----RNRDSLELEAVCVKLKGNPV 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064 43/202 (21%)
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566 14/62 (23%)
leucine-rich repeat 205..228 CDD:275380 5/22 (23%)
leucine-rich repeat 229..252 CDD:275380 6/27 (22%)
LRR_8 252..311 CDD:290566 14/72 (19%)
leucine-rich repeat 253..276 CDD:275380 5/22 (23%)
leucine-rich repeat 277..300 CDD:275380 5/22 (23%)
LRR_8 299..359 CDD:290566 19/79 (24%)
leucine-rich repeat 301..324 CDD:275380 6/36 (17%)
leucine-rich repeat 325..348 CDD:275380 6/28 (21%)
LRR_RI 327..567 CDD:238064 61/230 (27%)
leucine-rich repeat 349..371 CDD:275380 5/21 (24%)
LRR_8 370..425 CDD:290566 15/54 (28%)
leucine-rich repeat 372..393 CDD:275380 3/20 (15%)
leucine-rich repeat 394..415 CDD:275380 7/20 (35%)
leucine-rich repeat 418..486 CDD:275380 23/72 (32%)
leucine-rich repeat 441..464 CDD:275378 9/23 (39%)
LRR_8 487..545 CDD:290566 16/63 (25%)
leucine-rich repeat 487..510 CDD:275380 5/24 (21%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
LRR_8 533..589 CDD:290566 5/17 (29%)
leucine-rich repeat 535..558 CDD:275380 5/15 (33%)
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP008173XP_317291.3 leucine-rich repeat 116..138 CDD:275380 6/21 (29%)
leucine-rich repeat 139..162 CDD:275380 5/22 (23%)
LRR_RI 154..>313 CDD:238064 51/187 (27%)
leucine-rich repeat 163..187 CDD:275380 8/43 (19%)
LRR_8 186..244 CDD:290566 18/58 (31%)
leucine-rich repeat 188..211 CDD:275380 8/22 (36%)
LRR_4 212..248 CDD:289563 10/38 (26%)
leucine-rich repeat 212..233 CDD:275380 5/20 (25%)
leucine-rich repeat 234..256 CDD:275380 9/24 (38%)
leucine-rich repeat 257..279 CDD:275380 8/24 (33%)
leucine-rich repeat 280..302 CDD:275380 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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