DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and GPRTAK1

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_312088.4 Gene:GPRTAK1 / 1273136 VectorBaseID:AGAP002824 Length:491 Species:Anopheles gambiae


Alignment Length:432 Identity:96/432 - (22%)
Similarity:159/432 - (36%) Gaps:124/432 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   674 PWETAIN------FNEEQLQTQTGGQIATS--YMEEYFEEHDVSGPATGYGFGTGLFSGMSTEDF 730
            ||.|..|      .|..::....|..|..|  |:.:.|                      .||..
Mosquito    22 PWSTDFNTTVIGELNRTEVLDVLGEMITRSRGYVPKEF----------------------ITECL 64

  Fly   731 QPGSVQCLPMPGPFLPCADLFDWWTLRCGVWVVF----LLSLLGNGTVVFVLLCSRSKMDVPRFL 791
            .|.:.....:|            |.|:....|||    |:::.||..|::::|..|....|..:.
Mosquito    65 FPTTKSPYELP------------WQLKTAWGVVFGAMLLVAITGNCIVLWIVLAHRRMRTVTNYF 117

  Fly   792 VCNLAAADFFMGIYLGILAIVDAATLGEFRMFAIPWQM-SVLCQLSGFLAVLSSELSVYTLAVIT 855
            :.||:.||..|...        ..:.....|....|.. ||.|.::.|:|.:|...||:||..|:
Mosquito   118 LLNLSVADLLMSSL--------NCSFNFIFMLNSDWPFGSVYCTINNFMANMSVASSVFTLVAIS 174

  Fly   856 LERNYAITHAIHLNKRLSLKQAGYIMSVGWVFALIMALMPLVGVSDYRKFAVCLPFETTTG---- 916
            .:|..||.|.  |..|.|.|:|...:.:.|..:.::|             |.||.:.|...    
Mosquito   175 FDRYIAIVHP--LRHRTSRKKARIFLLIIWALSCVLA-------------APCLMYSTVMTKRYN 224

  Fly   917 -----------------PASLT-YVISLMFI---NGCAFLTLMGCYLKMYWAIRGSQAWNTN--- 957
                             |.|:. |:.:|:|:   .|...|.::.||     ::.|.:.|.:.   
Mosquito   225 NGKTRTVCYMLWPDGRYPTSMADYIYNLVFLILTYGIPMLIMIVCY-----SLMGRELWGSRSIG 284

  Fly   958 -------DSRIAK------RMALLVFTDF-LCWSPIAFFSITAIFGLQLIS---LEQAKIFTVFV 1005
                   :|..:|      ||.::|.|.| :||.|...|.:.|....|:.|   ::|..:...::
Mosquito   285 EHTERQLESMKSKKKVSVVRMFIIVVTIFAICWLPYHLFFVYAYHNNQMTSSSYVQQLYLGFYWL 349

  Fly  1006 LPLNSCCNPFLYAIMTKQFK---KDCVTL-CKHFEESRVVGG 1043
            ...|:..||.:|..|..:|:   ::.:.. |..|..||:..|
Mosquito   350 AMSNAMVNPIIYYWMNGRFRVYFQEIICFCCLQFINSRMRDG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433 36/132 (27%)
7tm_1 770..1017 CDD:278431 68/292 (23%)
GPRTAK1XP_312088.4 7tm_4 86..361 CDD:304433 70/302 (23%)
7tm_1 96..361 CDD:278431 68/292 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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