DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP000054

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_311104.5 Gene:AgaP_AGAP000054 / 1272222 VectorBaseID:AGAP000054 Length:1593 Species:Anopheles gambiae


Alignment Length:633 Identity:172/633 - (27%)
Similarity:256/633 - (40%) Gaps:162/633 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 NLPNEVVVLDLGNNNLTK--LEAN-------SFFMAPNLEELTLSDNSIINM--DPNAFYGLAKL 229
            |:|.|:...   :|:|.:  |:||       .||....|.:|.||||.||.:  |...|..|.:|
Mosquito    27 NVPEEIFRY---SNSLEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVEL 88

  Fly   230 --------------KRL-SLQNCGLKSLP----PQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQ 275
                          |.| |||.....|.|    |..|..|..||.|.||..:|:||..| .|.|.
Mosquito    89 DVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQD-FGCLS 152

  Fly   276 KLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPR----MPNLIVLLLKRNQIM 336
            ||.:|.|..||...:| .:::.|..||.|:||.|.:     ::.|.    :|:|..|.|..||::
Mosquito   153 KLVSLELRENLLKNLP-ESISQLTKLERLDLGDNEI-----DELPSHVGYLPSLQELWLDHNQLL 211

  Fly   337 KI--SAGALKNLTALKV--------------------LELDDNLISSLPEGLSKLSQLQELSITS 379
            ::  ..|.||.|..|.|                    |.|..||:.:||.|:|||:.|..|.:..
Mosquito   212 RLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQ 276

  Fly   380 NRLRWINDT-ELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELEACHALEI 443
            |||..:||: .....||.|.:..|.||.: |.....|     |:|::                  
Mosquito   277 NRLHTLNDSIGCCVHMQELILTENFLSEL-PATVGNM-----LVLNN------------------ 317

  Fly   444 LKLDRAGIQEVPANL--CRQTPRLKSLELKTNSLKRIP-NLSSCRDLRLLDLSSNQIEKIQGKPF 505
            |.:||..:..||:.|  |||   |..|.|:.|.|.|:| .|.:|.:|.:||:|.|.::.:   |:
Mosquito   318 LNVDRNSLVAVPSELGNCRQ---LGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHL---PY 376

  Fly   506 NGLK-QLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNNIF 569
            :.:. ||..:.||.|:.:.:|  .||  |.   :|...||      :..:.|           :.
Mosquito   377 SLVNLQLKAVWLSENQSQPVP--TFQ--PD---VDETTNE------QVLTCF-----------LL 417

  Fly   570 PE---LPESGLRALLHLKTFNNPKLREFPPPDTF-----PRIQTLILSYAYHCCAFLPLVAMSS- 625
            |:   :|             :||..||....:.:     .|..::..:..:......|.|..:: 
Mosquito   418 PQQRYVP-------------SNPSQREDTDSENWEEREASRTHSVKFTEDFGADRDTPFVRQNTP 469

  Fly   626 QKKTSQVQEAVLFPSDAEFD------MTLWNNSMMNIWPQMHNLSKQLGASMHDPWETAINFNEE 684
            ..|..:::...||..:.:.|      .||...|...  |.:.|.|....|:|.|....||..:||
Mosquito   470 HPKELKMKAHKLFAKERKSDDLSGNLDTLSEESASR--PSLLNRSGYGTATMEDIQGHAIPHDEE 532

  Fly   685 QLQTQTGGQIATSYMEEYFEEHDVSGPATGYGFGTGLFSGMSTEDFQP 732
            |.:...|...|...:|...::.|      ||....| |.....||..|
Mosquito   533 QGEAAAGSAEAGGGVEGAQDDED------GYEKRVG-FEVNEDEDDDP 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 1/2 (50%)
LRR_RI 180..>383 CDD:238064 82/258 (32%)
leucine-rich repeat 183..204 CDD:275380 7/29 (24%)
LRR_8 203..263 CDD:290566 27/80 (34%)
leucine-rich repeat 205..228 CDD:275380 11/24 (46%)
leucine-rich repeat 229..252 CDD:275380 11/41 (27%)
LRR_8 252..311 CDD:290566 25/58 (43%)
leucine-rich repeat 253..276 CDD:275380 11/22 (50%)
leucine-rich repeat 277..300 CDD:275380 7/22 (32%)
LRR_8 299..359 CDD:290566 22/85 (26%)
leucine-rich repeat 301..324 CDD:275380 7/26 (27%)
leucine-rich repeat 325..348 CDD:275380 9/24 (38%)
LRR_RI 327..567 CDD:238064 74/266 (28%)
leucine-rich repeat 349..371 CDD:275380 12/41 (29%)
LRR_8 370..425 CDD:290566 17/55 (31%)
leucine-rich repeat 372..393 CDD:275380 7/21 (33%)
leucine-rich repeat 394..415 CDD:275380 7/20 (35%)
leucine-rich repeat 418..486 CDD:275380 20/70 (29%)
leucine-rich repeat 441..464 CDD:275378 9/24 (38%)
LRR_8 487..545 CDD:290566 17/58 (29%)
leucine-rich repeat 487..510 CDD:275380 6/23 (26%)
leucine-rich repeat 511..534 CDD:275380 7/22 (32%)
LRR_8 533..589 CDD:290566 7/58 (12%)
leucine-rich repeat 535..558 CDD:275380 4/22 (18%)
leucine-rich repeat 559..580 CDD:275380 2/23 (9%)
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP000054XP_311104.5 leucine-rich repeat 16..38 CDD:275380 3/13 (23%)
LRR_RI 23..259 CDD:238064 74/241 (31%)
LRR_8 38..95 CDD:290566 18/56 (32%)
leucine-rich repeat 39..58 CDD:275380 5/18 (28%)
leucine-rich repeat 62..84 CDD:275380 10/21 (48%)
LRR_8 84..138 CDD:290566 16/53 (30%)
leucine-rich repeat 85..107 CDD:275380 4/21 (19%)
leucine-rich repeat 108..130 CDD:275380 7/21 (33%)
leucine-rich repeat 131..176 CDD:275380 19/46 (41%)
LRR_8 152..210 CDD:290566 20/63 (32%)
leucine-rich repeat 177..199 CDD:275380 7/26 (27%)
LRR_8 198..256 CDD:290566 15/57 (26%)
leucine-rich repeat 200..222 CDD:275380 7/21 (33%)
leucine-rich repeat 223..245 CDD:275380 3/21 (14%)
LRR_8 246..300 CDD:290566 20/53 (38%)
leucine-rich repeat 246..268 CDD:275380 10/21 (48%)
LRR_8 315..371 CDD:290566 24/76 (32%)
leucine-rich repeat 315..337 CDD:275380 8/39 (21%)
leucine-rich repeat 361..382 CDD:275380 6/23 (26%)
PDZ 766..854 CDD:214570
PDZ_signaling 943..1032 CDD:238492
PDZ_signaling 1139..1228 CDD:238492
PDZ_signaling 1238..1327 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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