DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and RXFP2

DIOPT Version :10

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_570718.1 Gene:RXFP2 / 122042 HGNCID:17318 Length:754 Species:Homo sapiens


Alignment Length:892 Identity:208/892 - (23%)
Similarity:337/892 - (37%) Gaps:254/892 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 FFMAPNLEELTLSDNSIINMD---------------PNAFY---------GLAKLKRLSLQNCGL 239
            |.:..|:::..|:..|:|...               |.||:         |..:      :|||.
Human    24 FIVLINVKDFALTQGSMITPSCQKGYFPCGNLTKCLPRAFHCDGKDDCGNGADE------ENCGD 82

  Fly   240 KSLPPQSFQGLAQLTSLQLNGNA-LVSLDGDCLGHLQK------LRTLRLE---GNLFYRIPTNA 294
            .|       |.|.:.. .::||| .|:|..:|.  |::      .:...||   |:| ..:|..:
Human    83 TS-------GWATIFG-TVHGNANSVALTQECF--LKQYPQCCDCKETELECVNGDL-KSVPMIS 136

  Fly   295 LAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLI 359
                ..:..|:|..|.:..:.|:.|.:...|..:.|:.|.|..||..|...|..|::|.|:.|.|
Human   137 ----NNVTLLSLKKNKIHSLPDKVFIKYTKLKKIFLQHNCIRHISRKAFFGLCNLQILYLNHNCI 197

  Fly   360 SSLPEGLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILS 424
            ::|..|:.|         ..::|.|:          :||  .||::.||...|.|::.|  ..||
Human   198 TTLRPGIFK---------DLHQLTWL----------ILD--DNPITRISQRLFTGLNSL--FFLS 239

  Fly   425 DVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLS--SCRDL 487
            .|...     |||                :|..:|.|.|:|..::|:.|.:|.:.|.:  ||..|
Human   240 MVNNY-----LEA----------------LPKQMCAQMPQLNWVDLEGNRIKYLTNSTFLSCDSL 283

  Fly   488 RLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEA 552
            .:|.|..|||..:..|.|:.||.|.:|.||.|.|..|....|:.:..||.|:|..|.:.|:||..
Human   284 TVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTITELSPHLFKDLKLLQKLNLSSNPLMYLHKNQ 348

  Fly   553 FSGFTALEDLNLGNNIFPELPESGLRALLHLKTFNNPKLREFPPPDTFPRIQTLILSYAYHCCAF 617
            |.....|:.|:|..   .|:|....|....:|..::...:.|                  ..|::
Human   349 FESLKQLQSLDLER---IEIPNINTRMFQPMKNLSHIYFKNF------------------RYCSY 392

  Fly   618 LPLVAMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSMMNIWPQMHNLSKQLGASMHDPWETAINFN 682
            .|.|.:                                                           
Human   393 APHVRI----------------------------------------------------------- 398

  Fly   683 EEQLQTQTGGQIATSYMEEYFEEHDVSGPATGYGFGTGLFSGMSTEDFQPGSVQCLPMPGPFLPC 747
                                                                  |:|:.......
Human   399 ------------------------------------------------------CMPLTDGISSF 409

  Fly   748 ADLFDWWTLRCGVWVVFLLSLLGNGTVVFVLLCSRSKMDVPRFLVCNLAAADFFMGIYLGILAIV 812
            .||.....||..|||:..::..||..|:.:....:::.......:..|..||..||:||..:.|.
Human   410 EDLLANNILRIFVWVIAFITCFGNLFVIGMRSFIKAENTTHAMSIKILCCADCLMGVYLFFVGIF 474

  Fly   813 DAATLGEFRMFAIPWQMSVLCQLSGFLAVLSSELSVYTLAVITLERNYAITHAIHLNKRLSLKQA 877
            |....|:::.:|:.|..||.|:|.||||:||:|:||..|..:|||:...|..... |.|...:|.
Human   475 DIKYRGQYQKYALLWMESVQCRLMGFLAMLSTEVSVLLLTYLTLEKFLVIVFPFS-NIRPGKRQT 538

  Fly   878 GYIMSVGWVFALIMALMPLVGV----SDYRKFAVCLP--FETTTGPASLTYVISLMF-INGCAFL 935
            ..|:...|:...::|::|....    :.|.|..||.|  ::.|....|..|.:.:.. :|..|||
Human   539 SVILICIWMAGFLIAVIPFWNKDYFGNFYGKNGVCFPLYYDQTEDIGSKGYSLGIFLGVNLLAFL 603

  Fly   936 TLMGCYLKMYWAIRGSQAWNTNDSR--------IAKRMALLVFTDFLCWSPIAFFSITAIFGLQL 992
            .::..|:.|:.:|: ..|..|.:.|        :|.|...:||:|.:||.|:....|.::|.:::
Human   604 IIVFSYITMFCSIQ-KTALQTTEVRNCFGREVAVANRFFFIVFSDAICWIPVFVVKILSLFRVEI 667

  Fly   993 ISLEQAKIFTVFVLPLNSCCNPFLYAIMTKQFKKDCVTLC-KHFEES 1038
            .....:.| .:|.||:||..||.||.:.|..||.....|. ||..:|
Human   668 PDTMTSWI-VIFFLPVNSALNPILYTLTTNFFKDKLKQLLHKHQRKS 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 LRR <157..390 CDD:443914 50/224 (22%)
leucine-rich repeat 158..179 CDD:275380
leucine-rich repeat 183..204 CDD:275380 1/4 (25%)
leucine-rich repeat 205..228 CDD:275380 7/46 (15%)
leucine-rich repeat 229..252 CDD:275380 5/22 (23%)
leucine-rich repeat 253..276 CDD:275380 7/23 (30%)
leucine-rich repeat 277..300 CDD:275380 5/25 (20%)
LRR 292..612 CDD:443914 84/321 (26%)
leucine-rich repeat 301..324 CDD:275380 5/22 (23%)
leucine-rich repeat 325..348 CDD:275380 8/22 (36%)
leucine-rich repeat 349..371 CDD:275380 8/21 (38%)
leucine-rich repeat 372..393 CDD:275380 2/20 (10%)
leucine-rich repeat 394..415 CDD:275380 7/20 (35%)
leucine-rich repeat 418..486 CDD:275380 18/69 (26%)
leucine-rich repeat 441..464 CDD:275378 3/22 (14%)
leucine-rich repeat 487..510 CDD:275380 9/22 (41%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..558 CDD:275380 9/22 (41%)
leucine-rich repeat 559..580 CDD:275380 6/20 (30%)
7tmA_Glyco_hormone_R 754..1028 CDD:320264 86/288 (30%)
TM helix 1 755..781 CDD:320264 8/25 (32%)
TM helix 2 788..813 CDD:320264 8/24 (33%)
TM helix 3 833..863 CDD:320264 15/29 (52%)
TM helix 4 875..897 CDD:320264 5/21 (24%)
TM helix 5 918..947 CDD:320264 8/29 (28%)
TM helix 6 956..986 CDD:320264 11/37 (30%)
TM helix 7 996..1021 CDD:320264 10/24 (42%)
RXFP2NP_570718.1 LDLa 45..80 CDD:238060 4/40 (10%)
LRR <128..370 CDD:443914 83/293 (28%)
LRR 1 138..159 5/20 (25%)
leucine-rich repeat 139..162 CDD:275380 5/22 (23%)
LRR 2 162..183 7/20 (35%)
leucine-rich repeat 163..186 CDD:275380 8/22 (36%)
LRR 3 186..207 8/29 (28%)
leucine-rich repeat 187..210 CDD:275380 8/31 (26%)
LRR 4 210..231 9/32 (28%)
leucine-rich repeat 211..234 CDD:275380 10/34 (29%)
LRR 5 234..255 9/43 (21%)
leucine-rich repeat 235..258 CDD:275380 10/45 (22%)
LRR 6 258..279 5/20 (25%)
leucine-rich repeat 259..282 CDD:275380 7/22 (32%)
LRR 7 282..303 8/20 (40%)
leucine-rich repeat 283..306 CDD:275380 9/22 (41%)
LRR 8 306..327 8/20 (40%)
leucine-rich repeat 307..330 CDD:275380 8/22 (36%)
LRR 9 330..351 9/20 (45%)
leucine-rich repeat 331..354 CDD:275380 9/22 (41%)
LRR 10 354..375 6/23 (26%)
leucine-rich repeat 355..374 CDD:275380 6/21 (29%)
7tmA_RXFP2_LGR8 416..702 CDD:320632 86/288 (30%)
TM helix 1 417..443 CDD:320632 8/25 (32%)
TM helix 2 450..475 CDD:320632 8/24 (33%)
TM helix 3 495..525 CDD:320632 15/29 (52%)
TM helix 4 536..558 CDD:320632 5/21 (24%)
TM helix 5 586..615 CDD:320632 8/28 (29%)
TM helix 6 631..661 CDD:320632 9/29 (31%)
TM helix 7 670..695 CDD:320632 10/25 (40%)
Blue background indicates that the domain is not in the aligned region.

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