DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP013059

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_003436644.1 Gene:AgaP_AGAP013059 / 11175769 VectorBaseID:AGAP013059 Length:517 Species:Anopheles gambiae


Alignment Length:351 Identity:95/351 - (27%)
Similarity:153/351 - (43%) Gaps:46/351 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 LTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYR-IPTNALAGLRTLEALNLGSNLLTIIND 316
            :|.|.::...::.:.......|..|.:..:..:|||| |..|:......|..:.:....:|:::.
Mosquito    62 ITKLTISNKKIIGVPTKMFASLPNLESFIVLNSLFYREIDPNSFVDCNKLNHIEITGTNITLLDS 126

  Fly   317 EDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGL-SKLSQLQELSITSN 380
            ..||:.|.|..||...|:|.:|...|.:.|..|:.|.|..|.::.||.|: .||.:|:.|.:..|
Mosquito   127 HMFPKTPKLQYLLFHHNRIAEIKHDAFEFLGELEELNLSYNNLTRLPSGVFHKLRKLKTLDLNHN 191

  Fly   381 RLRWIN-DTELPR----SMQMLDMRANPLSTISPGAFRGMSKLRKL-----ILSDVRTLRSFPEL 435
            ||..:: |:..|.    ::..||...|.|..:|   :..:| :||:     .|:.|....:..|.
Mosquito   192 RLLLLSFDSWFPPDGAVALTYLDASYNQLVDMS---WTEIS-VRKVNLKYNNLTSVHVNGNCSEF 252

  Fly   436 EACH-ALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRD-LRLLDLSSNQIE 498
            .|.| |::::.:.|.         |    .|:.|.|..|.|:....|..|.| ||.||:|.|..:
Mosquito   253 HASHNAIDMVTVGRN---------C----SLEKLYLAHNRLQGFDWLQRCADTLRSLDISHNLQQ 304

  Fly   499 KIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLN 563
            |  |..|..|||:..|.:....| :|.......:.||:.||:..|.:..|..|..:....||.|.
Mosquito   305 K--GTDFLNLKQITALNIECTNI-SLNYKTLHDLRKLRFLDISYNNLKKIDLENLTSQRLLERLM 366

  Fly   564 L-GNNI-----------FPELPESGL 577
            : ||.|           ||.|...|:
Mosquito   367 ISGNPIANISIGSIKRNFPNLKSLGI 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064 36/131 (27%)
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566 2/9 (22%)
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566 11/58 (19%)
leucine-rich repeat 253..276 CDD:275380 3/22 (14%)
leucine-rich repeat 277..300 CDD:275380 7/23 (30%)
LRR_8 299..359 CDD:290566 17/59 (29%)
leucine-rich repeat 301..324 CDD:275380 4/22 (18%)
leucine-rich repeat 325..348 CDD:275380 8/22 (36%)
LRR_RI 327..567 CDD:238064 73/253 (29%)
leucine-rich repeat 349..371 CDD:275380 9/22 (41%)
LRR_8 370..425 CDD:290566 16/64 (25%)
leucine-rich repeat 372..393 CDD:275380 7/25 (28%)
leucine-rich repeat 394..415 CDD:275380 5/20 (25%)
leucine-rich repeat 418..486 CDD:275380 17/73 (23%)
leucine-rich repeat 441..464 CDD:275378 2/22 (9%)
LRR_8 487..545 CDD:290566 20/57 (35%)
leucine-rich repeat 487..510 CDD:275380 10/22 (45%)
leucine-rich repeat 511..534 CDD:275380 3/22 (14%)
LRR_8 533..589 CDD:290566 17/57 (30%)
leucine-rich repeat 535..558 CDD:275380 6/22 (27%)
leucine-rich repeat 559..580 CDD:275380 10/31 (32%)
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP013059XP_003436644.1 leucine-rich repeat 62..85 CDD:275380 3/22 (14%)
LRR_8 84..145 CDD:290566 16/60 (27%)
leucine-rich repeat 86..110 CDD:275380 7/23 (30%)
leucine-rich repeat 111..134 CDD:275380 4/22 (18%)
LRR_8 133..193 CDD:290566 21/59 (36%)
leucine-rich repeat 135..158 CDD:275380 8/22 (36%)
LRR_RI 158..398 CDD:238064 72/255 (28%)
leucine-rich repeat 159..182 CDD:275380 9/22 (41%)
leucine-rich repeat 183..209 CDD:275380 7/25 (28%)
leucine-rich repeat 230..269 CDD:275380 10/51 (20%)
LRR_8 269..348 CDD:290566 28/81 (35%)
leucine-rich repeat 270..288 CDD:275380 6/17 (35%)
leucine-rich repeat 293..337 CDD:275380 15/46 (33%)
LRR <309..>401 CDD:227223 24/85 (28%)
leucine-rich repeat 338..358 CDD:275380 6/19 (32%)
leucine-rich repeat 362..382 CDD:275380 6/19 (32%)
leucine-rich repeat 387..399 CDD:275378 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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