DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and SCARF2

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_699165.3 Gene:SCARF2 / 91179 HGNCID:19869 Length:871 Species:Homo sapiens


Alignment Length:630 Identity:151/630 - (23%)
Similarity:195/630 - (30%) Gaps:273/630 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CCDGYIRDENNEC-VPLC---NDCGASGKCLLPNVCLCGKGYVSRKDHGHCE-----PECSESCV 120
            ||.|: |.:.:|| :.:|   :.|..:..|:.|..|.|..||........|.     |:|.|.| 
Human    64 CCAGW-RQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKELC- 126

  Fly   121 NGKCVAPDECECLAGHRFVNGSQTACEPICVEDCANGRCLE-TGKCLCNN---GYQRDEKLKKCV 181
                                    :|.|       :|:|.: ||:|.|:.   |       .:|.
Human   127 ------------------------SCHP-------HGQCEDVTGQCTCHARRWG-------ARCE 153

  Fly   182 PICQDACYHGDC-VAPNECRCHPGHEQRLGVPWICDPICSSGCANGYCQGAEVCACKMGYAHKDN 245
            ..||  |.||.| .....|||.||.       |...  |:|.|   ||                 
Human   154 HACQ--CQHGTCHPRSGACRCEPGW-------WGAQ--CASAC---YC----------------- 187

  Fly   246 TLASGCEPVCNPPCTNGTCISPGHCACSEGHVFAEGSRHECVPSCRSG-CENGYCSSPGRCECHE 309
            :..|.|:|            ..|.|.|..|. :.....::|  :|.|. ||    ...|||:|. 
Human   188 SATSRCDP------------QTGACLCHAGW-WGRSCNNQC--ACNSSPCE----QQSGRCQCR- 232

  Fly   310 GFEKTSPHRCSPTCRPGCGQNSRCAAPD-TCACDVGYVFVNGSTTECEPFCPRNCRNGICSSPGV 373
              |:|...||...|:  |.: .||...| ||||:.||                  |...|..|  
Human   233 --ERTFGARCDRYCQ--CFR-GRCHPVDGTCACEPGY------------------RGKYCREP-- 272

  Fly   374 CTCLEGFQALLSFYCIPVCSKTCIHGSCVAPNEC-----RCFTGYRPNPSLGANVCEP-----IC 428
              |..||..|       .|.:.|  |.|.....|     ||.|            |||     .|
Human   273 --CPAGFYGL-------GCRRRC--GQCKGQQPCTVAEGRCLT------------CEPGWNGTKC 314

  Fly   429 SQGCVHGFCIAPEICQCDLGFIKRWATGTCEPHCPQKCVNSHCLG--SGVC-RCYEGYKLRPGST 490
            .|.|..||                :..| |...|| .|.:.|...  :|.| ||..|:       
Human   315 DQPCATGF----------------YGEG-CSHRCP-PCRDGHACNHVTGKCTRCNAGW------- 354

  Fly   491 SICDPECQPGCRNGTCVEPNSCACFAGYEDTKVPYECVPSCRPRCENGRCS-SPGHCECDPG--- 551
             |.| .|:..|.|||..|  .||           :.|..     |.:|.|. ..|.|.|.||   
Human   355 -IGD-RCETKCSNGTYGE--DCA-----------FVCAD-----CGSGHCDFQSGRCLCSPGVHG 399

  Fly   552 -HVVTNSSEPNSCRPQCQEQCINAECVAPEKCACLPRYRFLPDSSTECEPICSKGCLSGQECVAP 615
             |          |...|......|:|.  :.|:|                             ..
Human   400 PH----------CNVTCPPGLHGADCA--QACSC-----------------------------HE 423

  Fly   616 DTCAGFESLISPTTGK-HLAFHWSMFV------LAILLCLALVMI 653
            |||       .|.||. ||..:....|      |.:|:||.|.::
Human   424 DTC-------DPVTGACHLETNQRKGVMGAGALLVLLVCLLLSLL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
SCARF2NP_699165.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
PHA03247 <534..871 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..871
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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