DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and tnfaip6

DIOPT Version :10

Sequence 1:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_001035333.2 Gene:tnfaip6 / 678516 ZFINID:ZDB-GENE-060421-2654 Length:271 Species:Danio rerio


Alignment Length:175 Identity:40/175 - (22%)
Similarity:53/175 - (30%) Gaps:60/175 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ANCTTNCGPLVGRTRTET--YLGFTDVCCDGYIRDENNECVPLCNDCGASGKCLLPNVCLCGKGY 102
            |.|....|.|....:.|.  .:|| .||..|::            |.|..|..::.....||.|.
Zfish    66 AVCNFEGGTLATFDQLEAARQIGF-HVCAAGWL------------DKGRVGYPIVKAGSNCGFGK 117

  Fly   103 VSRKDHGHCEPECSESCVNGKCVAPDECECLAGHRFVNGSQTACEPICVEDCANGRCLETGKCLC 167
            |...|:|:...:.....|  .|..|...||       .|..|..|                |.|.
Zfish   118 VGIIDYGYRLNKSERWDV--YCYNPVAKEC-------GGVHTDPE----------------KVLV 157

  Fly   168 NNGY---QRDEKLKKCVPICQDACYHGDCVAPNECRCHPGHEQRL 209
            :.||   .:||::          ||.       ..|...||..||
Zfish   158 SPGYPDEYQDEQI----------CYW-------HIRVRFGHRIRL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_788047.1 None
tnfaip6NP_001035333.2 Link_domain_TSG_6_like 46..138 CDD:239592 20/86 (23%)
CUB 145..254 CDD:395345 17/81 (21%)

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