DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and megf10

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_001922524.2 Gene:megf10 / 564571 ZFINID:ZDB-GENE-080506-1 Length:1120 Species:Danio rerio


Alignment Length:893 Identity:215/893 - (24%)
Similarity:298/893 - (33%) Gaps:336/893 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CCDGYIRDENNECVPLCNDCGASGKCLLPNVCLCGKGY-----VSRKDHGHCEPECSESC----- 119
            ||.|:. :..:.|||.|.:....|:|:.||.|.|..|:     .|..|..|..|.||..|     
Zfish    91 CCPGFY-ESGDICVPHCAEKCVHGRCVAPNTCQCEPGWGGADCSSACDRDHWGPHCSSRCQCKNE 154

  Fly   120 -----VNGKCV-APD----ECECLAGH-RFVNGSQTACEPICVEDCANGRCLE-TGKCLCNNGY- 171
                 :.|.|: ||.    .||.|..| .:.|..|..|  :|..   |..|.. ||:|:|:.|| 
Zfish   155 ALCNPITGACICAPGYHGWRCEDLCDHSTYGNNCQQKC--LCQN---NATCHHITGECVCSPGYT 214

  Fly   172 -----------QRDEKLKKCVPICQD--ACYH--GDCVAP----------------------NEC 199
                       :..::.::..| ||:  .|:|  |:|..|                      .||
Zfish   215 GAFCEDLCPPGKHGQQCEERCP-CQNGGVCHHVTGECSCPAGWMGMVCGQPCPTGRFGKNCSQEC 278

  Fly   200 RCHPGHEQRLGVPWICDP-----ICSSGCANGYCQGAEVCACKMGYAHKDNTLASGCEPVCNPPC 259
            :||.|        .||.|     :||||.....||.    .|::|      |...||...|.  |
Zfish   279 QCHNG--------GICSPSTGQCVCSSGYTGERCQD----QCQVG------TYGIGCSQACR--C 323

  Fly   260 TNGT-CIS-PGHCACSEGH--------VFAEGSRH-ECVPSCRSGCENGYCSSP--GRCECHEGF 311
            .||. |.. .|.|.|.:|:        :..:|... :|...|.....|.....|  |.|.|..|:
Zfish   324 VNGAQCYHVSGACLCEQGYTGESCEERICPDGQYGLKCDRKCPCNTNNTRSCHPMSGECSCQSGW 388

  Fly   312 EKTSPHRCSPTCRPG-----CGQNSRC-------AAPDTCACDVGYVFVNGSTTECEPFCPR--- 361
               |...|:.||.||     |.:..||       :....|.|..||   .||  :|...||.   
Zfish   389 ---SGLYCNETCAPGFYGEACQEVCRCQNGADCHSVSGECICAPGY---KGS--DCAIACPPGTY 445

  Fly   362 --------NCRNGICSSP--GVCTCLEGFQALLSFYCIPVCSKTCIHG--------SCVAPN--- 405
                    :|:||...||  |.|:|..|:..:       .||..|..|        |||..|   
Zfish   446 GINCTSLCSCKNGAICSPIDGSCSCQAGWHGV-------DCSINCPSGTWGLGCNLSCVCGNGGA 503

  Fly   406 ------ECRCFTGYRP----------------------------NPSLG---------ANVCEPI 427
                  :|.|..|:|.                            :||.|         ...|:.:
Zfish   504 CNALDGKCTCTPGWRGDRCDQHCQDGTYGLDCRERCDCSHADGCHPSTGHCRCLAGWTGIHCDSV 568

  Fly   428 CSQG-----------CVHGFCIAPE--ICQCDLGFIKRWATGTCEP-----HCPQKCVNSHCLGS 474
            |::|           |.:....:|:  .|:|..||........|.|     .|.|.|  .||:.|
Zfish   569 CAEGRWGPNCSLSCNCKNSASCSPDEGACECAPGFRGTTCQHICSPGVFGHRCSQAC--PHCVHS 631

  Fly   475 --------GVCRCYEGYKLRPGSTSICDPECQPG-----------C-RNGTCVEP--NSCACFAG 517
                    |.|.|..|:|     .::|:..|..|           | .|||| .|  .||.|:.|
Zfish   632 NGPCHHVTGQCECLPGFK-----GALCNEVCPSGKFGKNCGGSCTCTNNGTC-SPMDGSCQCYPG 690

  Fly   518 Y--EDTKVPY-------ECVPSCRPRCENGR-CSS-PGHCECDPGHVVTNSSE-------PNSCR 564
            :  .|...|.       .|:.:|  .|.||. ||: .|.|:|..|......::       ...|.
Zfish   691 WIGSDCSQPCPPGQWGPNCIHTC--NCHNGAFCSAYDGECKCTAGWTGLYCTQRCPLGFYGKDCV 753

  Fly   565 PQCQEQCIN-AEC-VAPEKCACLPRYRFLPDSSTECEPIC-----SKGCLSGQECVAPDTC---- 618
            ..|  ||.| |:| ....:|.|  |..|:   ...||..|     ..||....:|:...||    
Zfish   754 QAC--QCENGADCNHISGQCTC--RTGFM---GRHCETKCPAGSYGYGCRQVCDCLNNSTCDHMT 811

  Fly   619 ----------------AGFESLISPTTGKHLAFHWSMF----VLAILLCLALVMIPLLVLREMQR 663
                            ||.....||.:....|.....:    :..|::.:.||:| ||:|..:.|
Zfish   812 GTCYCNPGWKGTRCDQAGGNIAESPNSLTSAALPMDSYQIGAITGIIILVLLVLI-LLLLFIIYR 875

  Fly   664 RRRNGDKQS------------------------------SRLIENPSY 681
            :::.|.:.|                              |....||||
Zfish   876 KKQKGKESSMPSVTYTPTMRANTDYAIAESLPQTEVLPNSNYFSNPSY 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
megf10XP_001922524.2 EMI 29..96 CDD:284877 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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