DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and megf11

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_009291879.1 Gene:megf11 / 563468 ZFINID:ZDB-GENE-060503-252 Length:1114 Species:Danio rerio


Alignment Length:951 Identity:225/951 - (23%)
Similarity:289/951 - (30%) Gaps:419/951 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 CGKGYVSRKDHGHCEPECSESCVNGKCVAPDECECLAGHRFVNGSQTACE-----PICVE--DCA 155
            |..||....|  .|.|.|||.|.:|:||:||.|:|..|...::.| :.||     |.|..  .|.
Zfish    94 CCPGYFESGD--LCVPRCSEECAHGRCVSPDTCQCEPGWGGLDCS-SGCESGYWGPHCSNRCQCK 155

  Fly   156 NGRCLE--TGKCLCNNGYQ--RDEKL-------KKCVPICQ----DACYHGDCVAPNECRCHPGH 205
            ||....  ||.|:|.:|||  |.|.|       |.|...||    ..|:|    ...||.|.||:
Zfish   156 NGALCNPITGACVCTDGYQGWRCEDLCEPGYYGKGCQLQCQCLNGATCHH----ETGECICAPGY 216

  Fly   206 EQRLGVPWICDPICSSGCANGYCQGAEVCACKMGYAHKDNTLASGCEPVCNPPCTN-GTCIS-PG 268
               :|      |||...|.:|              :|     ...||..|  ||.| |||.. .|
Zfish   217 ---MG------PICGERCPSG--------------SH-----GPQCEQRC--PCQNGGTCHHITG 251

  Fly   269 HCACSEGHV------------FAEGSRHECVPSCRSGCENGYCSS-PGRCECHEGFEKTSPHRCS 320
            .|:|..|..            :......||  |||:|   |.|.. .|:|:|..|:   |.|||.
Zfish   252 ECSCPAGWTGSVCAQPCPFGKYGINCSKEC--SCRNG---GLCDHITGQCQCMAGY---SGHRCQ 308

  Fly   321 PTCRPG-----------CGQNSRC-AAPDTCACDVGYVFVNGSTTE------------CEPFCPR 361
            ..|..|           |...::| .....|.||.|:   .|...:            |:.:||.
Zfish   309 EECPVGTYGPQCTLHCDCQNGAKCYHINGACLCDTGF---KGHHCQDRFCPPGLYGLICDKYCPC 370

  Fly   362 NCRNGICSSP--GVCTCLEGFQALLSFYCIPVCSKTCIHG----SCVAPNECRCFTGYRPNPSLG 420
            |..|.|...|  |.|:|..|:..|       .|::||..|    .|..|  |:|..|...:...|
Zfish   371 NSTNTISCHPLTGECSCTAGWTGL-------YCNETCPPGYYGEGCGVP--CQCANGADCHSLTG 426

  Fly   421 ANVCEP-----ICSQGC-----------------------VHGFCIAPE---------------- 441
            |.:|.|     .|||.|                       :.|.||..|                
Zfish   427 ACICAPGYTGDDCSQTCPSGLFGTNCTSICHCHNQASCSPIDGSCICKEGWQGVDCSILCSSGTW 491

  Fly   442 ---------------------ICQCDLGFIKRWATGTCEPHCP---------QKCVNSHCLG--- 473
                                 .|.|..|    |....|:..||         ::|..:|..|   
Zfish   492 GLGCNQTCLCANGAACDPIDGSCTCSSG----WRGERCQQPCPDGTYELECRERCDCNHADGCDH 552

  Fly   474 -SGVCRCYEGYKLRPGSTSI-CDPECQPG-----------CRNGTCVEP--NSCACFAGYEDTKV 523
             ||:|||.      ||.|.| ||..|..|           |:||....|  .:|.|..||..|..
Zfish   553 VSGLCRCL------PGWTGIHCDSICPQGFWGSNCSMTCSCQNGGSCSPEDGTCVCAPGYRGTSC 611

  Fly   524 PYECVPS-----CR---PRC--ENGRCSS-PGHCECDPGH----------------------VVT 555
            ...|.|.     |.   |:|  ..|.|.. .|||||..|.                      :.|
Zfish   612 KRICPPGFYGHRCSQLCPQCVHSTGPCHHVTGHCECLAGFFGSLCNQVCPSGKFGKACAEICLCT 676

  Fly   556 NSSEPN----SCR--------------------PQCQEQC---INAECVAPE------------- 580
            |:...|    ||:                    |.|...|   ..|:|.|.:             
Zfish   677 NNGTCNPIDGSCQCFPGWTGDDCSQICPIGQWGPDCLNSCNCHNGAQCSAYDGECRCSLGWTGLY 741

  Fly   581 -------------------------------KCACLPRYRFLPDSSTECEPIC-----SKGCLSG 609
                                           :|||  |..|:   .|.||..|     ..||...
Zfish   742 CTQRCPSGFYGRDCAEVCRCQNGADCDHITGQCAC--RTGFI---GTNCEQKCPPGTFGYGCQQL 801

  Fly   610 QECVAPDTC----------AGFESL-----------------ISPTTGKHLAFHWSMFVLAILLC 647
            .||:...||          .|::.:                 |||..|.......::..:..||.
Zfish   802 CECMNNATCDYVTGTCYCSPGYKGIRCDQAALVMEELNPYTKISPALGSERQSAGAVMGIIFLLL 866

  Fly   648 LALVMIPLLV-LREMQR---------------RRRNGD---------KQSSRLIENPSY------ 681
            :.:.|:.|.| .|:.||               |..|.|         ..|.:...||||      
Zfish   867 IIMAMLSLFVWFRQRQRDKGQEMPSVSYTPALRVTNTDYSLSETSQSSSSGQCFSNPSYHTVAQC 931

  Fly   682 -----------GVVQANSEDTNS----------ELGIGLGD 701
                       |.:.....|.||          :||:..||
Zfish   932 NISSSITNNLDGTLTLKKGDRNSSEWRAYCNLNDLGVSRGD 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
megf11XP_009291879.1 EMI 32..98 CDD:311482 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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