DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and ltbp1

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_017207300.1 Gene:ltbp1 / 562072 ZFINID:ZDB-GENE-091202-8 Length:1527 Species:Danio rerio


Alignment Length:724 Identity:174/724 - (24%)
Similarity:241/724 - (33%) Gaps:241/724 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ETYLGFTDVCCDGYIRDENNECVPLCNDCGASGKCLLPNVCL-CGKGYVSRKDHGHCEPECSESC 119
            :|||.:..|.....:                 |:|......: |||..........|......|.
Zfish   483 QTYLQYQPVTSKSQL-----------------GRCFQETTGMQCGKALPGLSKQDACCGTVGTSW 530

  Fly   120 VNGKCVAPDEC---------ECLAGHRFVNGSQTACEPICVED------CANGRCLET---GKCL 166
            ...||   .:|         ||..|::.:||  |.|  |.:::      |.||.|:.|   .:|:
Zfish   531 GFHKC---QKCPKKPSIPLIECPQGYKRLNG--TRC--IDIDECQLQGVCPNGNCINTVGSYRCI 588

  Fly   167 CNNGYQRDEKLKKCVPIC------QDACYH-----GDCVAP-------NECRCHPGHEQRLGVPW 213
            ||.|:..|..|..|.|..      :.||:.     ..|:.|       ..|.|      .:|..|
Zfish   589 CNPGFVPDPSLTSCFPETPALREEKGACFRFVGSGKQCLHPVSTQLSKQLCCC------SVGKAW 647

  Fly   214 ICDPICSSGCANGYCQGAEVCACKMGY--------------AHKDN------------------- 245
              .|.|......|.....::|...|||              .|...                   
Zfish   648 --GPHCDRCPLPGTAAFKDICPGGMGYHVTPPYIYKPKPPNGHTQTDSQGYNNPTIRHQVPMDPP 710

  Fly   246 ----TLASGCE--------------------PVCNPPCTNGTCISPGHCACSEGHVFAEGSRHEC 286
                ||....|                    ||..||...|..|:|...|          ...||
Zfish   711 VPFPTLQQPVEALSITERQLPEVVEKVSPPAPVAIPPSNEGQDITPTQLA----------EIDEC 765

  Fly   287 V--PSCRSGCENGYCSSPGR---CECHEGFEKTSPHRCSPTC--------RPGCGQNSRCA-APD 337
            |  |..   |..|.|.:...   |.|.:|:...|.   ..||        .|....|.||. .|.
Zfish   766 VVRPDI---CGAGICYNTAESYTCFCDDGYRTDSE---GTTCVDVDECAENPSLCANGRCQNTPG 824

  Fly   338 --TCACDVGYV-FVNGST----TECEPFCPRNCRNGIC-SSPG--VCT-CLEGFQALLSFYCIPV 391
              .|.|::|:: ...||:    .||:.  .|.|.:|:| ::.|  :|: |.:||:. .:..|:.:
Zfish   825 GFLCVCELGFMPNERGSSCSDIDECQN--RRACPSGLCYNTLGSFMCSPCPDGFEG-KNGQCVDI 886

  Fly   392 --C--SKTCIHGSCVAPN-----ECRCFTGYRPNPSLGANVCEPI--CSQG--CVHGFCIAPE-- 441
              |  .:.|.||.|  .|     .|.|..|:.|.|.  ...|..|  |...  |:.|.|...:  
Zfish   887 NECLDKRVCAHGQC--SNLEGYFVCTCDEGFLPTPD--GKSCTDIDECQDDNVCIQGHCQNTQGS 947

  Fly   442 -ICQCDLGFIKRWATGTCE--PHC---PQ------KCVNSHCLGSGVCRCYEGYKLRPGSTSICD 494
             ||.|:.||....:...||  ..|   ||      :|||  .|||..|.|.:||: :..|||..|
Zfish   948 FICNCEPGFKLSSSGDQCEDVDECLVIPQTCDGVGQCVN--ILGSYQCNCPQGYR-QVNSTSCLD 1009

  Fly   495 -PECQPGCR----NGTCVEPNS---CACFAGYEDTKVPYECVPSCRPRCENGRCSSPGH------ 545
             .||:...:    ||.|:....   |.|.||:..|:...:.|..|  ......|.|.|.      
Zfish  1010 VDECEDDTQLCIPNGECLNTEGSFLCVCDAGFVSTRTGCQDVDEC--SLNENTCGSHGTCQNTIG 1072

  Fly   546 ---CECDPGHVVTNSSEPNSCRP--QCQ---EQCINAECVAPE---KCACLPRYRFLPDSSTECE 599
               |:||||  ..:|.:...|..  :|:   ..|..|.|...|   .|.|       ||...|.:
Zfish  1073 SFICQCDPG--FKDSQDGQGCVDVNECELLGNVCGEATCENREGTFLCLC-------PDDLQEFD 1128

  Fly   600 PICSKGCLS 608
            |:..| |:|
Zfish  1129 PMLGK-CIS 1136



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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