DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and NimB4

DIOPT Version :10

Sequence 1:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster


Alignment Length:479 Identity:128/479 - (26%)
Similarity:190/479 - (39%) Gaps:127/479 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLLFLVLLSGLQVQGCVKQAQVVKMRGTLVTMRKHQNS--------------ANCTTNCGP--- 48
            :|:|||.:|.||::|  :.:.|:.:.:...:.:|..|..              ::.||...|   
  Fly    14 LLVLFLCVLHGLELQ--LHEQQLQQQKDEQLRLRAEQRQRELLREHEALQRRLSSSTTTRKPYII 76

  Fly    49 --------------------------------LVGRTRTETYLGFTDVCCDGYIRDEN--NECVP 79
                                            :||.:.|..|:...:|||.|:.|.|.  ::|||
  Fly    77 PNGLSLPRRGEHPDKCRQEVPAVFFQYDKEVKIVGNSSTNPYMNVIEVCCKGWRRYEYDWSQCVP 141

  Fly    80 LCND-CGASGKCLLPNVCLCGKGYVSRKDHGHCEPECSESCVNGKCVAPDECECLAGHRFVNGSQ 143
            .|.: |..:|.|:....|:|...:|... ..:|.|.|...|.:|:|.....|:|..|:. ::||:
  Fly   142 DCGERCQENGFCVAGGKCVCFTDFVLNY-RNNCVPTCPLGCPHGRCYLNGTCQCDKGYE-LDGSR 204

  Fly   144 TACEPICVEDCA-NGRCLETGKCLCNNGYQ---RDEKLKKCVPICQDACYHGDCVAPNECRCHPG 204
            ..|:|.|...|. |..|||.|||.|..||.   |:.....|.|||...|.:|.||.||||.|.||
  Fly   205 KFCQPQCNATCGHNEVCLEPGKCSCAEGYTRGLRESAALGCQPICIPDCGYGHCVRPNECECFPG 269

  Fly   205 HEQRL-GVPWICDPICSSGCANGYCQGAEVCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPG 268
            .::|. |:  .|:..|...|.||:|.....|.|:.||.:..||..                    
  Fly   270 FQKRKNGI--TCEGDCYMTCENGFCANKTTCVCQNGYRYDKNTTT-------------------- 312

  Fly   269 HCACSEGHVFAEGSRHECVPSCRSGCENGYCSSPGRCECHEGFEKTSPHRCSPTCRPGCGQNSRC 333
                             |:|.|...|:||.|.|||.|.|.:|:.: :..||...|..|||...:|
  Fly   313 -----------------CLPDCGDNCDNGVCISPGNCRCFKGYVR-NRERCEAVCVGGCGFYGKC 359

  Fly   334 AAPDTCACDVGYVFVNGSTTECEPFCPRNCRNGICSSPGVCTCLEGFQALLSFYCIPVCSKTCIH 398
            .||:.|.|.:    |.|.....:     .|..|:|::.|.|.|..|....:.             
  Fly   360 IAPNVCGCAI----VPGPERTYQ-----RCEYGLCNAMGRCRCQVGMTRFID------------- 402

  Fly   399 GSCVAPNECRCFTGYRP---NPSL 419
             .|::|:....:....|   |.||
  Fly   403 -RCMSPDTVTTYASMNPVKVNASL 425

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