DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and Ccbe1

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_848908.1 Gene:Ccbe1 / 320924 MGIID:2445053 Length:408 Species:Mus musculus


Alignment Length:279 Identity:63/279 - (22%)
Similarity:93/279 - (33%) Gaps:111/279 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PLCNDCGAS----GKCLLPNVCLCGKGYV-SRKDHGHCEPE------CSES--------CV--NG 122
            ||.:..||:    ||.|.|.:.|...|:. :.::    |||      |||:        |:  :|
Mouse     5 PLPSRGGAAKRQLGKSLGPLLLLLALGHTWTYRE----EPEDRDREVCSENKITTTKYPCLKSSG 65

  Fly   123 KCVAPDECECLAGHRFVNG----------SQTACEPICVEDCANGRCLETGKCLCNNGYQ--RDE 175
            :.......:|..|::||.|          :|..||..|.::.  ||.|    |.|..||:  |:.
Mouse    66 ELTTCFRKKCCKGYKFVLGQCIPEDYDICAQAPCEQQCTDNF--GRVL----CTCYPGYRYDRER 124

  Fly   176 KLKKCVPICQDACYHGDCVAPNECRCHPGHEQRLGVPWICDPICSSGCANGYCQGAEVCACKMGY 240
            ..|:..|.|.|.   .:|...|...|                             |.:|.     
Mouse   125 HQKRERPYCLDI---DECATSNTTLC-----------------------------AHICI----- 152

  Fly   241 AHKDNTLASGCEPVCNPPCTNGTCISPGHCACSEGHVFAEGSRHECVPSCRSGCENGYCSSPGRC 305
                ||:.|                  .||.|.||::..:..|     :|..|  :.|.:..|..
Mouse   153 ----NTMGS------------------YHCECREGYILEDDGR-----TCTRG--DKYPNDTGHE 188

  Fly   306 ECHEGFEKTSPHRCSPTCR 324
            |..|...|..  .|..||:
Mouse   189 EKSENEVKAG--TCCATCK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
Ccbe1NP_848908.1 EGF_CA 135..176 CDD:214542 15/104 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..408
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.