DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and NimB2

DIOPT Version :10

Sequence 1:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster


Alignment Length:343 Identity:115/343 - (33%)
Similarity:160/343 - (46%) Gaps:66/343 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 FVNGSQTA-CEPICVEDCANGRCLETGK---------------CLCNNGYQRDEKL-KKCVPICQ 185
            |:|.:::| ...:|.::......|...:               .:|.:||:|:..: ::|.|||.
  Fly   122 FINKTRSAMASGVCYKEVPTASLLRNSRDQFVGNGTTPDMSRIQVCCDGYERNPHIYRRCEPICA 186

  Fly   186 DACYHGDCVAPNECRCHPGHEQRLGVPWICDPICSSGCANGYCQGAEVCACKMGYAHKDNTLASG 250
            |.|.:|.|.|||.|.|.|||.:.  ....|...|..||.||.|.....|.|:.||:.:..| ...
  Fly   187 DDCRNGICTAPNTCVCIPGHVRT--AEGKCISTCPLGCGNGVCDERNECKCREGYSLEPET-RKY 248

  Fly   251 CEPVCNPPCTNGTCISPGHCACSEGH-VFAEGSRHECVPSCRSGCENGYCSSPGRCECHEGFEKT 314
            |:|.|.|.|:.|.|::|..|||.:|: :.|:||   |.|.|.| ||||.|::||.|.        
  Fly   249 CQPECKPGCSFGRCVAPNKCACLDGYRLAADGS---CEPVCDS-CENGKCTAPGHCN-------- 301

  Fly   315 SPHRCSPTCRPGCGQNSRCAAPDTCACDVGYVFVNGSTTECEPFCPRNCRNGICSSPGVCTCLEG 379
                                      |:.||:.:.|   .|||.|...|:||.|..|.:|.|..|
  Fly   302 --------------------------CNAGYLKLQG---RCEPICSIPCKNGRCIGPDICECASG 337

  Fly   380 FQ-ALLSFYCIPVCSKTCIHGSCVAPNECRCFTGYRPNPSLGANVCEPICSQGCVHGFCIAPEIC 443
            |: ...|..|:|.|...|::|.||..|:|.|.||| .......|:|:|.|.|||.:|:|.||..|
  Fly   338 FEWDRKSAECLPKCDLPCLNGVCVGNNQCDCKTGY-VRDEHQRNICQPHCPQGCQNGYCSAPNFC 401

  Fly   444 QCDLGFIKRWATG--TCE 459
            .|..||||....|  ||:
  Fly   402 ICRPGFIKSGIKGRQTCQ 419

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