DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and Scarf2

DIOPT Version :10

Sequence 1:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_036015777.1 Gene:Scarf2 / 224024 MGIID:1858430 Length:838 Species:Mus musculus


Alignment Length:690 Identity:164/690 - (23%)
Similarity:209/690 - (30%) Gaps:293/690 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLLFLVLLSGLQVQGCVKQAQVVKMRGTLVTMRKHQNSANCTTNCGPLVGRTRTETYLGFTDVCC 66
            |||.|.||.||..      .|.:..||..|          |.|....::             .||
Mouse    22 LLLLLWLLPGLAA------PQDLNPRGRNV----------CRTPGSQVL-------------TCC 57

  Fly    67 DGYIRDENNEC-VPLC---NDCGASGKCLLPNVCLCGKGYVSRKDHGHCE-----PECSESCVNG 122
            .|: |...:|| :.:|   :.|..:..|:.|..|.|..||........|.     |:|.|.|   
Mouse    58 AGW-RQLGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKERC--- 118

  Fly   123 KCVAPDECECLAGHRFVNGSQTACEPICVEDCANGRCLE-TGKCLCNN---GYQRDEKLKKCVPI 183
                                  :|.|       :|:|.: ||:|.|:.   |       .:|...
Mouse   119 ----------------------SCHP-------HGQCEDVTGQCTCHARRWG-------ARCEHA 147

  Fly   184 CQDACYHGDC-VAPNECRCHPGHEQRLGVPWICDPICSSGCANGYCQGAEVCACKMGYAHKDNTL 247
            ||  |.||.| .....|||.||.       |...  |:|.|   ||                 :.
Mouse   148 CQ--CQHGTCHPRSGACRCEPGW-------WGAQ--CASAC---YC-----------------SA 181

  Fly   248 ASGCEPVCNPPCTNGTCISPGHCACSEGHVFAEGSRHECVPSCRSG-CENGYCSSPGRCECHEGF 311
            .|.|:|            ..|.|.|..|. :.....::|  :|.|. ||    ...|||:|.   
Mouse   182 TSRCDP------------QTGACLCHVGW-WGRSCNNQC--ACNSSPCE----QQSGRCQCR--- 224

  Fly   312 EKTSPHRCSPTCRPGCGQNSRCAAPD-TCACDVGYVFVNGSTTECEPFCPRNCRNGICSSPGVCT 375
            |:....||...|:  | .:.||...| |||||.||                  |...|..|    
Mouse   225 ERMFGARCDRYCQ--C-SHGRCHPVDGTCACDPGY------------------RGKYCREP---- 264

  Fly   376 CLEGFQALLSFYCIPVCSKTCIHGSCVAPNEC-----RCFTGYRPNPSLGANVCEP-----ICSQ 430
            |..||..       |.|.:.|  |.|.....|     ||.|            |||     .|.|
Mouse   265 CPAGFYG-------PGCRRRC--GQCKGQQPCTVVEGRCLT------------CEPGWNGTKCDQ 308

  Fly   431 GCVHGFCIAPEICQCDLGFIKRWATGTCEPHCPQKCVNSHCLG--SGVC-RCYEGYKLRPGSTSI 492
            .|..||                :..| |...|| .|.:.|...  :|.| .|..|:        |
Mouse   309 PCATGF----------------YGEG-CGHRCP-PCRDGHACNHVTGKCTHCNAGW--------I 347

  Fly   493 CDPECQPGCRNGTCVEPNSCACFAGYEDTKVPYECVPSCRPRCENGRCS-SPGHCECDPG-HVVT 555
            .| .|:..|.|||..|                 :|...|.. |.:|.|. ..|.|.|.|| |   
Mouse   348 GD-RCETKCSNGTYGE-----------------DCAFVCSD-CGSGHCDFQSGRCLCSPGVH--- 390

  Fly   556 NSSEPNSCRPQCQEQCINAECVAPEKCACLPRYRFLPDSSTECEPICSKGCLSGQECVAPDTCAG 620
                    .|.|     |..|.|.                           |.|.:|.  ..|:.
Mouse   391 --------GPHC-----NVTCPAG---------------------------LHGVDCA--QACSC 413

  Fly   621 FESLISPTTGK-HLAFHWSMFVL---AILLCLALVMIPLL 656
            .|....|.||. ||..:....|:   |:|..|..:::.||
Mouse   414 HEESCDPVTGACHLETNQRKGVMGAGALLTLLLGLLLSLL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_788047.1 None
Scarf2XP_036015777.1 PHA03307 526..>836 CDD:223039
PHA03247 <683..838 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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