DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and Megf11

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:XP_006511049.1 Gene:Megf11 / 214058 MGIID:1920951 Length:1138 Species:Mus musculus


Alignment Length:920 Identity:228/920 - (24%)
Similarity:310/920 - (33%) Gaps:358/920 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CCDGYIRDENNE-CVPLCNDCGASGKCLLPNVCLCGKGY-----VSRKDHGHCEPECSESCVNGK 123
            ||.||.  ||.: |:|||.:....|:|:.|:.|.|..|:     .|..|..|..|.||..|    
Mouse    87 CCPGYY--ENGDFCIPLCTEECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHWGPHCSNRC---- 145

  Fly   124 CVAPDECECLAGHRFVNGSQTACEPICVEDCANGRCLETGKCLCNNGYQ--RDEKL-------KK 179
                 :|:        ||:  .|.||            ||.|:|..|::  |.|:|       |.
Mouse   146 -----QCQ--------NGA--LCNPI------------TGACVCAPGFRGWRCEELCAPGTHGKG 183

  Fly   180 CVPICQDACYHGDCVAP--NECRCHPGHEQRLGVPWICDPICSSGCANGYCQGAEVCACKMGYAH 242
            |..:||  |:||....|  .||.|.||:   .||  .|:.:|..|....:|:..  |.|:.|...
Mouse   184 CQLLCQ--CHHGASCDPRTGECLCAPGY---TGV--YCEELCPPGSHGAHCELR--CPCQNGGTC 239

  Fly   243 KDNTLASGCEP-----VCNPPCTNGT----CIS-------------PGHCACSEGHVFAEGSRHE 285
            ...|....|.|     ||..||..||    |..             .|.|.|:.|:: .:..:.|
Mouse   240 HHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYM-GDRCQEE 303

  Fly   286 C-------VPSCRSGCENGYCSSP--GRCECHEGF------EKTSPH------------------ 317
            |       :.|.|..|.||...||  |.|||..|:      |:..|.                  
Mouse   304 CPFGTFGFLCSQRCDCHNGGQCSPATGACECEPGYKGPSCQERLCPEGLHGPGCTLPCPCDTENT 368

  Fly   318 -RCSP-----TCRPG-----CGQN-------SRCAAPDTCACDVGYVFVNGSTT----------- 353
             .|.|     ||:||     |.::       :.|..|.||........:.||.|           
Mouse   369 ISCHPVTGACTCQPGWSGHYCNESCPAGYYGNGCQLPCTCQNGADCHSITGSCTCAPGFMGEVCA 433

  Fly   354 ----------ECEPFCPRNCRNGICSSP--GVCTCLEGFQAL-LSFYCIPV------CSKTCI-- 397
                      .|...|  :|.||...||  |.|||.||:|.| .|..| |.      |::|||  
Mouse   434 VPCAAGTYGPNCSSVC--SCSNGGTCSPVDGSCTCREGWQGLDCSLPC-PSGTWGLNCNETCICA 495

  Fly   398 HGSCVAP--NECRCFTGYR--------PNPSLGANV-----------CEPI-------------- 427
            :|:..:|  ..|.|..|:.        |:.:.|.|.           |:|:              
Mouse   496 NGAACSPFDGSCACTPGWLGDSCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIR 560

  Fly   428 ----CSQG-----------CVHGFCIAPE--ICQCDLGFIKRWATGTCEP----H-CPQKC-VNS 469
                |..|           |.:|...:||  .|:|..||........|.|    | |.|.| :..
Mouse   561 CDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCV 625

  Fly   470 HCLG-----SGVCRCYEGYKLRPGSTSICDPECQPG------------CRNGTCVEP--NSCACF 515
            |..|     ||:|.|..|:     |.::|:..|..|            ..|||| .|  .||.||
Mouse   626 HSRGPCHHISGICECLPGF-----SGALCNQVCAGGHFGQDCAQLCSCANNGTC-SPIDGSCQCF 684

  Fly   516 AGYEDTKVPYECVPSCRP-----------RCENG-RCSS-PGHCECDPGHVVTNSSEPNSCRPQC 567
            .|:    :..:|..:|..           .|.|| .||: .|.|.|.||....      .|..:|
Mouse   685 PGW----IGKDCSQACPSGFWGSACFHTCSCHNGASCSAEDGACHCTPGWTGL------FCTQRC 739

  Fly   568 QE-----------QCIN-AEC-VAPEKCACLPRYRFLPDSSTECEPICSK-----GCLSGQECVA 614
            ..           ||.| |.| ....||.|...:     |...||..|:.     ||....||:.
Mouse   740 PSAFFGKDCGHICQCQNGASCDHITGKCTCRTGF-----SGRHCEQRCAPGTFGYGCQQLCECMN 799

  Fly   615 PDTC----------AGFESL-----------------ISPTTGKHLAFHWSMFVLAILLCLALVM 652
            ..||          .||:.:                 |||..|.......::..:.:||.|.:|:
Mouse   800 NATCDHVTGTCYCSPGFKGIRCDQAALMMDELNPYTKISPALGAERHSVGAVTGIVLLLFLVVVL 864

  Fly   653 IPLLVLREMQRRRRNGD-----------------------KQSS---RLIENPSYGVV------- 684
            :.|...|..:::.:..|                       .|||   :...|.||..:       
Mouse   865 LGLFAWRRRRQKEKGRDLAPRVSYTPAMRMTSTDYSLSDLSQSSSHAQCFSNASYHTLACGGPAT 929

  Fly   685 -QANSEDTNS 693
             ||::.|.||
Mouse   930 SQASTLDRNS 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
Megf11XP_006511049.1 EMI 25..92 CDD:400092 3/4 (75%)
EGF_CA 188..233 CDD:419698 18/53 (34%)
EGF_CA 274..319 CDD:419698 8/45 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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