DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and Stab2

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_619614.1 Gene:Stab2 / 192188 MGIID:2178743 Length:2559 Species:Mus musculus


Alignment Length:926 Identity:193/926 - (20%)
Similarity:260/926 - (28%) Gaps:436/926 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 QNSANCTTNCGP--------LVGRTRTETYLG---FTDV------CCDGYIRDENNECVP--LCN 82
            :|.:.|.||..|        ..|.......:|   :.||      ||.|:...:.|.| |  ..|
Mouse   690 KNWSKCPTNSEPTAIFTNKCFYGSRAWNLKIGCARYCDVTVEIPRCCKGFFGPDCNPC-PGGFMN 753

  Fly    83 DCGASGKCL----LPNVCLCGKGYVSRKDHGHCE---------PECSES--CVNGKC-------- 124
            .|..:|:|:    ....|:|..|:...:    |:         |:|:.:  ||:|.|        
Mouse   754 PCSGNGQCIDGLGGNGTCICEDGFQGSR----CQFCSKPNRYGPQCNRTCQCVHGICDNRLDSDG 814

  Fly   125 -VAPDEC-ECLAGHRFVNGSQTACEPICVEDC-ANGRC---LETGKCLCNNGYQRDEKLKKCVPI 183
             ..|..| |..|| ||.:...:||.|. ::.| .:..|   .||..|:||:||:.|..|......
Mouse   815 SCLPGTCREGTAG-RFCDKQTSACGPY-MQFCHIHATCEYSNETASCVCNDGYEGDGTLCSKKDP 877

  Fly   184 CQDACYHGDCVAPN-----------ECRCHPGHEQRLGVPWI-----CDPI--C----SSGC-AN 225
            |..:...|.| :||           .|.|..|        |.     |..|  |    |.|| .|
Mouse   878 CLGSTSRGGC-SPNAECIQASTGTYSCVCQRG--------WTGNGRDCVEINSCLLPSSGGCHDN 933

  Fly   226 GYC----QGAEVCACKMGYAHKDNTLASGCEPV---------CNPPCT-NGTCISPGHCACSEGH 276
            ..|    .|...|.||.|:  :.|.:  .|||:         |:|..| ..|......|.|.||:
Mouse   934 ATCLYVGPGQNECECKKGF--RGNGI--DCEPIISCLEQIEKCHPLATCQYTLSGVWSCVCQEGY 994

  Fly   277 VFAEGSRHEC---------------------------------------VPSCRS-----GCENG 297
               ||:...|                                       |||.::     ..|..
Mouse   995 ---EGNGVLCYGNVLMELSFLSEAAVFYQWINNASLQSMLSATSNLTVLVPSLQAIKDMDQNEKS 1056

  Fly   298 YCSS----PGRCECHE--GFEKT-------SPHRCSPTCRPGCGQNSRCAAPDTCACDVGYVFVN 349
            :..|    |...:.|.  |..:.       |.|..:.:.:   |...|....|......|..||:
Mouse  1057 FWLSRNNIPALIKYHTLLGTYRVADLQTLPSSHMLATSLQ---GSFLRLDKADGNITIEGASFVD 1118

  Fly   350 GSTTECEPFCPRNCRNGIC---------------SSPGVCTCLE--------------------- 378
            |...         ..||:.               |.|.:.|.||                     
Mouse  1119 GDNA---------ATNGVVHIINKVLIPQRGLTGSLPSLLTRLEQMPDYSIFRGYIIHYNLASAI 1174

  Fly   379 ----------------------------------------------------------GFQALLS 385
                                                                      ||..||:
Mouse  1175 EAADAYTVFVPNNEAIESYIREKKATSLKEDILQYHVVLGEKLLRNDLHNGMHRETMLGFSYLLA 1239

  Fly   386 FYC---------IPV------CSKTCIH-------------------------GSCVAPNEC--- 407
            |:.         .|:      ..|..||                         |.|.....|   
Mouse  1240 FFLHNDQLYVNEAPINYTNVATDKGVIHGLEKVLEIKKNRCDNNDTIIVRGKCGKCSQQTLCPLE 1304

  Fly   408 --------RC-----FTGYR-------------------------PN----PSLGANVCEPICSQ 430
                    :|     |.|.|                         |.    |..|.|||..    
Mouse  1305 TKPLSETRKCIYSVYFMGKRSIFIGCQLQCVRTIITSACCAGFFGPQCQACPGKGQNVCSG---- 1365

  Fly   431 GCVHGFCI----APEICQCDLGFIKRWATGT-CEP--------HCPQ--KCVNSHC----LGSGV 476
               :|||:    ....|:|:.||     .|| ||.        ||.|  .||:..|    .|.|.
Mouse  1366 ---NGFCLDGVNGTGTCECEQGF-----NGTACETCTEGKYGIHCDQACSCVHGRCNQGPSGDGS 1422

  Fly   477 CRC---YEGYKLRPGSTSICDPECQPGCRNGTC-------VEPN---SCACFAGYEDTKVPYECV 528
            |.|   :.|.|        ||.|......||||       ::|:   ||.|.||::........:
Mouse  1423 CDCDVGWRGVK--------CDSEITTDNCNGTCHTSANCLLDPDGKASCKCAAGFQGNGTVCTAI 1479

  Fly   529 PSCRPRCENGRCSS--------PGH--CECDPGHVVTNSS----EPNSCRPQ---CQEQCINAEC 576
            .:|  ...||.||:        ||.  |.|..|:  |...    |.|.|...   |..   :|||
Mouse  1480 NAC--EISNGGCSAKADCKRTIPGSRVCVCKAGY--TGDGIVCLEINPCLENHGGCDR---HAEC 1537

  Fly   577 --VAPEK--CACLPRY 588
              ..|.:  |.|||:|
Mouse  1538 TQTGPNQAVCNCLPKY 1553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
Stab2NP_619614.1 EGF_3 254..283 CDD:289699
EGF_3 334..369 CDD:289699
Fasciclin 390..512 CDD:280607
Fasciclin 533..661 CDD:280607
EGF_3 844..872 CDD:289699 10/27 (37%)
EGF_3 928..959 CDD:289699 10/34 (29%)
EGF_3 965..1001 CDD:289699 10/38 (26%)
Fasciclin 1018..1137 CDD:280607 19/130 (15%)
Fasciclin 1156..1273 CDD:280607 9/116 (8%)
EGF_3 1482..1518 CDD:289699 11/39 (28%)
EGF_3 1524..1560 CDD:289699 11/33 (33%)
EGF_3 1566..1602 CDD:289699
Fasciclin 1628..1733 CDD:280607
Fasciclin 1758..1889 CDD:280607
EGF_3 2094..2129 CDD:289699
EGF_3 2135..2172 CDD:289699
Link_Domain 2206..2297 CDD:295393
FAS1 2363..2452 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000250 2510..2520
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2514..2559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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