DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and sdz-23

DIOPT Version :10

Sequence 1:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_505091.1 Gene:sdz-23 / 186544 WormBaseID:WBGene00019066 Length:267 Species:Caenorhabditis elegans


Alignment Length:176 Identity:39/176 - (22%)
Similarity:66/176 - (37%) Gaps:57/176 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   521 TKVPYECVPS-----CRPRCENG-RCSSPGHCECDPGHVVTNSSEPNSCRPQCQEQCINAECVAP 579
            |.:.:||:||     |:..|.:| :||..   || |.....|:|       |||.....::||  
 Worm   125 TSIRFECLPSFYGPKCQYYCTSGEKCSRD---EC-PKRKCQNNS-------QCQFDGSESKCV-- 176

  Fly   580 EKCACLPRYRFLPDSSTECEPICSKGCLSGQECVAPDTCAGFESLISPTTGKHLAFHWSMFVLAI 644
                                  |..|.: |:.|.           |..|...|.|....:.:.:|
 Worm   177 ----------------------CQSGYI-GEFCE-----------IDQTVFNHPADSAVVLMCSI 207

  Fly   645 L-LCLALVMIPLLVLREMQRRRRNGDKQSSRLIENPSYGVVQANSE 689
            : |.|.:::|.::|:.:.:||...   :.:.|.....:.|...||:
 Worm   208 VFLSLFIIIIAVMVIMKQKRRTIT---EPTNLSTGKEFSVEICNSD 250

Return to query results.
Submit another query.