DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and F35A5.4

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_508657.2 Gene:F35A5.4 / 185249 WormBaseID:WBGene00018026 Length:524 Species:Caenorhabditis elegans


Alignment Length:641 Identity:147/641 - (22%)
Similarity:206/641 - (32%) Gaps:249/641 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VKMRGTLVTMRKHQNSANCTTNCGPLVGRTRTETYLGFTDVCCDGYIRDENNECVPLC--NDCGA 86
            :||.|:|:|                   |.|::                  .:|..:|  .:||.
 Worm    29 LKMNGSLIT-------------------RVRSK------------------RQCCAMCPSGNCGC 56

  Fly    87 SGKCLLPNVCLCGKGYVSRKDHGHCEPECSESCVNGK---CVAPDECECLAGHRFVNGSQTACEP 148
             |.|         .|:|:..|  .|:|.|:::||..|   ||  |:                |.|
 Worm    57 -GSC---------SGFVTCPD--RCQPMCTQACVMAKTSVCV--DQ----------------CMP 91

  Fly   149 ICVEDCANGRCLETGKCLCNNGYQRDEKLKKCVPICQDACYHGDCVAPNECRCHPGHEQRLGVPW 213
            .|...|.|         |..:|...|:   :|:|:|..||.:. ...|.||...           
 Worm    92 KCDSACIN---------LVRSGPSCDQ---QCMPLCLPACINA-IQGPTECAPQ----------- 132

  Fly   214 ICDPICSSGCANGYCQGAEVCACKMGYAHKDNTLASGCEPVCNPPCTNG--TCISPGHCACSEGH 276
             |.|.|||.|..   |....|             ...|:|||.|.|...  ..|....||.|   
 Worm   133 -CMPSCSSNCIQ---QVFPSC-------------PQQCQPVCTPQCIQSIQVAIQRPTCASS--- 177

  Fly   277 VFAEGSRHECVPSCRSGCENGYCSSPGRCECHEGFEKT-SPHRCSPTCRPGCGQNSRCAAPDTCA 340
                     |:|||...|...|             |.| ....|.|.|.|.|  :|.|....|| 
 Worm   178 ---------CMPSCSQSCIQKY-------------EITVEQETCVPACMPAC--SSACVQAVTC- 217

  Fly   341 CDVGYVFVNGSTTECEPFCPRNCRNGICSSPGV--C--TCLEGFQALLSF---------YCIPVC 392
                        :.|...||..|....|....:  |  ||::..|..:..         .|:|.|
 Worm   218 ------------STCTNNCPSICSQANCIPQCMPRCLPTCIQQIQISVPLPPPAPRCDSMCMPSC 270

  Fly   393 SKTCIHGSCVAPNECRCFTGYRPNPSLGANVCEPICSQGCVHGFCIAPEICQCDLGFIKRWATGT 457
            |.:|:....:.|.:||                 |:|:..||....::..:.||         ...
 Worm   271 SPSCVQQYSLCPQQCR-----------------PMCTNACVTNLQVSRPVSQC---------LPA 309

  Fly   458 CEPHCPQKCVNS----HCLGSGVCRCYEGYKLRPGSTSICDPECQPGCRNGTCVEPNSCACFAGY 518
            |.|.|...||.|    .|..|....|.:.|.::...|. |..:|.|.|.: :|:...||.     
 Worm   310 CMPSCTSSCVQSMCPQQCYPSCDMNCIQQYAVQMAPTP-CAAQCMPLCES-SCIARLSCV----- 367

  Fly   519 EDTKVPYECVPSCRPRCENGRCSSPGHCECDPGHVVTNSSEPNSCRPQCQEQCI--NAE----CV 577
                  ..|:|:|.|.|.....:.|  .:|.|           :|.|.||..|:  :||    |.
 Worm   368 ------QTCMPACSPTCVQNYAAGP--IQCAP-----------ACMPLCQPTCVQQHAEVVVACG 413

  Fly   578 APEKCACLPRYRFLPDSSTEC-EPICSKGCLSGQECVAPDTCAGFESLISPTTGKH 632
            .|  |.|.|.|       .:| :.:|   ||..:     :..|.|..|...||..:
 Worm   414 VP--CQCQPGY-------VQCSQNLC---CLKYK-----NMAAKFRKLSGSTTNSN 452



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I3394
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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