DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC2 and pqn-13

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_001122848.1 Gene:pqn-13 / 178954 WormBaseID:WBGene00004104 Length:661 Species:Caenorhabditis elegans


Alignment Length:703 Identity:141/703 - (20%)
Similarity:217/703 - (30%) Gaps:276/703 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TTNCGPLVGRTRTETYLGFTDVCCDGYIRDENN-----------ECV--------------PLCN 82
            |.|....|.|.:.:......:.||...::.:.|           :|.              |.| 
 Worm    66 TRNETAAVSRAKRQCCFAAQNSCCPQQVQSQCNCAALQIQVQQCDCANMLQTQCGCPSISSPSC- 129

  Fly    83 DCGASGKCLLPNVCLCGKGYVS------------------------RKDHGHCEPECSESCVNGK 123
            |||.    |......||.|.:|                        ::....|.|.|..|||...
 Worm   130 DCGT----LQNQYSSCGCGSLSYQVSCNQCQQQSQPQIIVVQQPQQQQCSSQCMPACLPSCVQSS 190

  Fly   124 CVAPDECECLAGHRFVNGSQTACEPICVEDCANGRCLETGKCLCNNGYQRDEKL----------- 177
            | ||                 ||:|:|...|..               |:.:::           
 Worm   191 C-AP-----------------ACQPMCSSSCVQ---------------QQQQQIIVVQQPQQQCA 222

  Fly   178 KKCVPICQDACYHGDCVAPNECRCHPGHEQRLGVPWICDPICSSGCANGYCQGAEVCACKMGYAH 242
            ..|:|.||.:|....| ||                 .|.|:|||.|.....|...|    :....
 Worm   223 SSCMPSCQPSCVQQAC-AP-----------------ACQPMCSSSCVQQQQQQIIV----VQQPQ 265

  Fly   243 KDNTLASGCEPVCNPPCTNGTCISPGHCACSEGHVFAEGSRHE-------CVPSCRSGCENGYCS 300
            :....|..|.|.|...|||| | |.|:|..::..|.......:       |:|||:..|...   
 Worm   266 QQQQCAPSCMPACLSSCTNG-C-SGGNCNNNQPQVVVVQQNQQQNQCTSSCMPSCQPSCVQA--- 325

  Fly   301 SPGRCECHEGFEKTSPHRCSPTCRPGCGQNSRCAAPDTCACDVGYVFVNGSTTECEPFCPRNCRN 365
                             .|:|.|:|.|  :|:|.........|........|:.|.|.|..:|..
 Worm   326 -----------------ACAPACQPMC--SSQCVEQQQAQIVVVQQPQQQCTSSCMPACQSSCVQ 371

  Fly   366 GICSSPGV---CT--CLEGFQALL-------------SFYCIPVCSKTCIHGSCVAPNECRCFTG 412
            ..| :|..   |:  |:|..||.:             :..|:|.|:..|:....:.         
 Worm   372 QAC-APACQPKCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTIC--------- 426

  Fly   413 YRPNPSLGANVCEPICSQGC-VHGFCIAPEICQCDLGFIKRW-------------ATGTCEPHCP 463
                    |..|:|.|...| .:..|:...:..|:...:::.             ....|:|.|.
 Worm   427 --------AAACQPSCQSSCSSNAQCVQACLPSCESSCVQQQQPSVVVVQDSQSSCPSACQPSCS 483

  Fly   464 QKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPECQPGCRNGT-CVEPNSCACFAGYEDT------ 521
            |:|:.:    ..:|:            |.|.|.||..|.:.| ||:    ||....:.|      
 Worm   484 QQCIQA----QNLCQ------------SACQPSCQSSCGSNTQCVQ----ACIPSCQQTCGQQAQ 528

  Fly   522 -----KVPYE--CVPSCRPRCENGRCSSPGHCECDPGHVVTNSSEPNSCRPQCQEQCINAE---- 575
                 :.|.:  ||.:|:|:|:. .|.|...|             .::|:..||:.|.|.:    
 Worm   529 PVIVVQQPQQNNCVQACQPQCQQ-TCGSNVQC-------------VSACQNSCQQSCGNQQQQQV 579

  Fly   576 ------------CVAPEKCACLPRYRFLPDSSTECEPICSKGCLSGQECV-AP 615
                        |.||....|:|          :|:|.|...|:...:.: ||
 Worm   580 IVVQSSPMCGQACQAPPVLQCVP----------QCQPSCQPSCMQQYQFIQAP 622



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I3394
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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