DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and dsl-6

DIOPT Version :10

Sequence 1:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_502148.2 Gene:dsl-6 / 178063 WormBaseID:WBGene00001108 Length:303 Species:Caenorhabditis elegans


Alignment Length:169 Identity:36/169 - (21%)
Similarity:54/169 - (31%) Gaps:72/169 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TNCGPLVGR------TRTETYLGFTDVCCDGYIRDEN---NECVPLCNDCGASGKCLLPNVCLCG 99
            :|..|.||.      |||...|.....|      |||   .:|...|::                
 Worm    94 SNLTPRVGLISPIQVTRTFDGLRIIIEC------DENWFGEKCDVFCDN---------------- 136

  Fly   100 KGYVSRKDHG-HCEPECSESCVN-------GKCVAPDECECLAGHRFVNGSQTACEPICVEDCAN 156
               :.::.|| .|......||:|       .|.:.|.:|.|.                     .|
 Worm   137 ---IEQRLHGKRCNYRGVPSCLNMFTGAGCMKMITPMDCSCK---------------------NN 177

  Fly   157 GRCL---ETGKCLCNNGYQRD------EKLKKCVPICQD 186
            |:|:   ||..|.|..|::.|      |.:|..:.:.|:
 Worm   178 GKCVDSAETPICECTRGFKGDTCEEMHETIKAAINVQQE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_788047.1 None
dsl-6NP_502148.2 DSL 101..163 CDD:128366 17/86 (20%)
EGF_CA <174..201 CDD:238011 10/47 (21%)

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