DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and dsl-1

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_500054.1 Gene:dsl-1 / 176939 WormBaseID:WBGene00001103 Length:252 Species:Caenorhabditis elegans


Alignment Length:143 Identity:33/143 - (23%)
Similarity:50/143 - (34%) Gaps:62/143 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 HRFVNGSQTACEPICVEDCA---NGRCLETGKCLCNNGYQRDEKLKKCVPICQDACYHG-DCVAP 196
            :|:.:|..  |:..|.:|.|   |.||.:.|...|..|                  :|| :|..|
 Worm   123 NRYWHGLH--CDHFCNDDFARTINRRCTQNGTLGCLEG------------------FHGPNCELP 167

  Fly   197 ---NECRCHPGHEQRLGVPWICDPICSSGCANGYCQ-GAEVCACKMG------------------ 239
               :.|:|..|.:            |.|...|.:.| |:.:|.|::|                  
 Worm   168 VPADSCKCQNGGK------------CVSSLENTWAQNGSLICECRLGHFEGKHCEKKSFNYFPKI 220

  Fly   240 ----YAHKDNTLA 248
                ||.||:.||
 Worm   221 EATTYATKDSHLA 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
dsl-1NP_500054.1 DSL 112..164 CDD:302925 14/60 (23%)
EGF_CA <175..210 CDD:238011 10/46 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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