DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and F56B3.2

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_499983.2 Gene:F56B3.2 / 176902 WormBaseID:WBGene00018928 Length:432 Species:Caenorhabditis elegans


Alignment Length:470 Identity:105/470 - (22%)
Similarity:145/470 - (30%) Gaps:195/470 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NGKCVAPDECECLAGHRFVNGSQTACEPICVEDCAN--GRCLETGKCLCNNGY--QRDEK--LKK 179
            |||......|:       :||           ||.|  ..||. |||.|:..|  .||||  |.|
 Worm    29 NGKSALNGVCD-------ING-----------DCENKGSICLR-GKCRCHPHYTETRDEKGRLPK 74

  Fly   180 CVPI-----------CQDA--CYHGDC---------VAPNEC--------RCHPGHEQRLGVPWI 214
            |.|:           |::.  |.:|:|         |:..||        ||...::        
 Worm    75 CAPLPAKIGARCSSKCREPLFCRNGECQCVQRGTTRVSNGECITTSRVGDRCSRHYD-------- 131

  Fly   215 CDPICS---SGCANGYCQGAEVCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSEGH 276
                |:   |.|.|..|    ||.        ..|:..|...|....|..|..  ||.....:  
 Worm   132 ----CTSPFSACVNSQC----VCI--------TGTIQMGSRCVAAANCPFGKL--PGQSCVRK-- 176

  Fly   277 VFAEGSRHECVPSCRSGCENG-YCSSPGRCE--------CHEGFEKTSPHRCSPTCRPGCGQNSR 332
              ::.|....:||.:..|..| .|.:.|..:        |.......:.:.|.|...|..    :
 Worm   177 --SDPSLAFNIPSNQDNCPMGQVCITAGESQVGHCCPVICPLNTTTDTRYSCDPDAAPAL----K 235

  Fly   333 CAAPDTCACDVGYVFVNGSTTE---CEPFC---------------PRNCRNGICSSPGVCTCLEG 379
            |.: |:..|   |...:||.::   |...|               ||...|..|:|...|...||
 Worm   236 CPS-DSHYC---YFLSDGSFSQAACCRRPCNAMAPNALYVDYHCMPRGQLNSACTSNAQCGGGEG 296

  Fly   380 FQALLSFYCIPVCSKTCIHGSCVAPNECRCFTGYRP----------NPSLGANVCEPICSQGCVH 434
            .:              |:.|      :|:|...:.|          |||..       ||:.|..
 Worm   297 ME--------------CMKG------QCQCQQNFHPAVDVLTNPLKNPSQS-------CSRDCES 334

  Fly   435 GFCIAPEICQ-----CDLGFIKRWATGTCEPHCPQKCVNSHCL-GSGVCRCYEGYKLRPGSTSIC 493
            ........|.     ..|.||::        .|||   ||.|. |..:|||  |:          
 Worm   335 ENLSKDTSCMKAVPLNSLCFIQK--------QCPQ---NSGCYRGRCMCRC--GF---------- 376

  Fly   494 DPECQPGCRNGTCVE 508
                  ..:||.|||
 Worm   377 ------AAKNGKCVE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
F56B3.2NP_499983.2 EB 111..157 CDD:279949 14/69 (20%)
EB 266..312 CDD:279949 12/65 (18%)
EB 332..383 CDD:279949 18/79 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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