DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and pqn-25

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_741140.1 Gene:pqn-25 / 175759 WormBaseID:WBGene00004114 Length:672 Species:Caenorhabditis elegans


Alignment Length:673 Identity:154/673 - (22%)
Similarity:223/673 - (33%) Gaps:237/673 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 HQNSANCTTNCGPLVGRTRTETYLGFTDVCCDGYIRDENNECVPLCND--CGASGKCLLPNVCLC 98
            :..:..|.:|..|.|..:...........|..||..: |..|.|..|.  |.::|.    |.||.
 Worm   103 YSTNTQCGSNSSPQVSASGQVVTCSTNTQCASGYTCN-NGACCPNTNSNTCSSNGN----NGCLA 162

  Fly    99 GKGYVSRKDHGHC--------EPECSESCVNGKCVAPDECECLAGHRFVNGSQTA-------CE- 147
            |:..|    :|.|        ..:.::.|:.|.....:.|:|.:|  :||.:|..       |: 
 Worm   163 GQTMV----NGQCYNSVNIGSACQSTQQCLGGSQCQNNICQCYSG--YVNVNQQCVISNGLNCQL 221

  Fly   148 ------PICV------EDC-ANGRCLETGKCL-----CNNGYQRDEKLKKCVPICQDACYHGDCV 194
                  ..|:      ::| .:.:|::...|:     |||.|:.  ....||||....|.....:
 Worm   222 GTVSYNSQCITLASPGQNCQTSSQCIDNSVCMNQMCTCNNNYRL--VYGYCVPITSSICQQTQTL 284

  Fly   195 APNECRCHPGHEQRLGVPWICDPICSSGC-ANGYCQGAEVCACKMGYAHKDNTLASG-CEPVCNP 257
            ..|:|              :...|....| ||..|.|..:|             .|| |:     
 Worm   285 VNNQC--------------VLLSIVGETCIANQQCVGGAMC-------------NSGTCQ----- 317

  Fly   258 PCTNGT------CISPGHCACSEGHVFAEGSRHECVPSCRSGCENGYCSSPGRC----ECHEGFE 312
             ||||.      |||....:|:...|...|.   |..:.:.|   |.||...:|    .|.... 
 Worm   318 -CTNGATAMYGYCISSSSSSCNSNQVSINGM---CYNTVQVG---GSCSFSQQCLNNAVCTNNI- 374

  Fly   313 KTSPHRCSPT-CRPGCGQNSRCAAPDTCACDVGYVFVN-GSTTECEPFCPRN--CRNGICSSP-- 371
                  |..| |...|..|..|.: :.|     |.:|: ||.......|..|  |.:.||..|  
 Worm   375 ------CVSTFCSVSCSTNQVCIS-NQC-----YNYVSIGSQCVGSQQCLSNSQCISSICQCPQG 427

  Fly   372 -----GVCTCLEGFQALLSFYCIPVCSKTCIHGSCVAPNECRCFTGYRPNPSLGANVCEPICSQG 431
                 ||||                       |:....|:|      :||..|..|.|....|.|
 Worm   428 TQQSNGVCT-----------------------GNNNNNNQC------QPNQVLINNQCYNTVSIG 463

  Fly   432 CVHGFCIAPEICQCDLGFIKRWATGTCEPHCPQKCV-NSHCLGSGVCRCYEGYKLRPGSTSICDP 495
                       .||..               ||:|: ||.|:.| :|:|      ..|||:: :.
 Worm   464 -----------FQCQF---------------PQQCLGNSQCMNS-MCQC------PTGSTNV-NG 494

  Fly   496 ECQPGCRNGTC-----VEPNSCACFAGYEDTKVPYEC--VPSC--RPRCENGRCSSP-------G 544
            .||.| .||.|     :..|.|     |....:.::|  ...|  ..:|.|..|..|       |
 Worm   495 YCQGG-SNGQCNSNQVLINNQC-----YNTVSIGFQCQFAQQCLGNSQCLNSICQCPSGSSNVNG 553

  Fly   545 HC------ECDPGHVVTNSSEPNSC------RPQCQ--EQCI-NAECVAPEKCACLPRYRFLPDS 594
            :|      :|:...|..|    |.|      ..|||  :||: |::|: ...|.|       |..
 Worm   554 YCQGGSNGQCNSNQVYYN----NQCYNTVPIGSQCQITQQCLGNSQCM-NSFCQC-------PSG 606

  Fly   595 STECEPICSKGCLSGQECVAPDT 617
            :|.....|:....|...|.|..|
 Worm   607 TTNVNNFCTTSSSSSNLCSAGQT 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
pqn-25NP_741140.1 EB 160..211 CDD:279949 14/56 (25%)
EB 219..270 CDD:279949 9/52 (17%)
EB 278..329 CDD:279949 17/83 (20%)
EB 341..>376 CDD:279949 9/47 (19%)
EB 384..435 CDD:279949 15/56 (27%)
EB 450..496 CDD:279949 19/79 (24%)
EB 504..555 CDD:279949 11/55 (20%)
EB 563..614 CDD:279949 16/62 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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