DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC2 and Krtap16-1

DIOPT Version :9

Sequence 1:NP_001285922.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster
Sequence 2:NP_001242986.1 Gene:Krtap16-1 / 100504183 MGIID:3650326 Length:502 Species:Mus musculus


Alignment Length:614 Identity:154/614 - (25%)
Similarity:202/614 - (32%) Gaps:216/614 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CTTNCG--PLVGRTRTETYLGFTDVCCDGYIRDENNECVPLCNDCGASGKCLLPNVCLCGKGYVS 104
            |:..|.  |.:....||...| ..||.....|.:..:.|...:.||:||         ||...  
Mouse     6 CSRKCPSLPAISLCSTEVSCG-GPVCLPSSCRSQTWQLVTCEDSCGSSG---------CGSQC-- 58

  Fly   105 RKDHGHCEPECSESCVNGKCVAPDECECLAGHRFVNGSQTACEPIC-VEDCANGRCLETGKCLCN 168
                  |:|.||.|    .|..|..||.           |.|||.| |..||...|.|       
Mouse    59 ------CQPSCSVS----SCCQPVCCEA-----------TICEPSCSVSSCAQPVCCE------- 95

  Fly   169 NGYQRDEKLKKCVPICQDACYHGDCVAPNECRCHPGHEQRLGVPWICDPICS-SGCANGYCQGAE 232
                        ..||:.:|..|.|..|..|..           .||:|.|| |.||...|..|.
Mouse    96 ------------ATICEPSCSMGSCCQPVCCEA-----------TICEPSCSVSTCAQPVCCEAT 137

  Fly   233 VC--ACKMGYAHKDNTLASGCEPVCNPPCTNGTC----ISPGHC-------ACSEGHVFAEGSRH 284
            :|  :|.:          |.|:|||   |...:|    ..|..|       .|.:..:       
Mouse   138 MCQPSCSV----------SSCQPVC---CETSSCQPVLCLPATCQPVICKPCCCQPVI------- 182

  Fly   285 ECVPSCRSGCENGYCSSPGRCECHEGFEKTSPHRCSP-TCRPGCGQNSRCAAPDTCACDVGYVFV 348
             |.|||.|    ..|:.|..|:         |..|.| .|.|.|.| ..|..|..|..      |
Mouse   183 -CEPSCCS----AVCAVPASCQ---------PMICEPVVCEPACCQ-PVCPTPSCCPS------V 226

  Fly   349 NGSTTECEPFCPRNCRNGICSSPGVCTCLEGF----QALLSFYCIPVCSK--TCIHGSCVAP--- 404
            ..:.:.|:|.   .|....|..|    |.|..    .|.::..|.|||.:  .|:.|.|..|   
Mouse   227 CSAASSCQPV---GCETSPCEPP----CSEASACQPSACMALVCEPVCLRPVCCVQGPCEPPCVS 284

  Fly   405 NECR---CFTGYRPNPSLGANVCEPICSQ--GCVHGFCIAPEICQCDLGFIKRWATGTCEP-HCP 463
            :.|:   |..         :::|:|:|.:  .|:...|: |..||.....:||..:.:||| .||
Mouse   285 SSCQDSSCCV---------SSICQPVCPEPSPCLPSVCV-PTPCQPSCYIVKRCRSVSCEPISCP 339

  Fly   464 QKCVNSHCLGSGVCRCYEGYKLRPGS--TSICDPECQPGCRNGTCVEPNSC--ACFAGYEDTKVP 524
            .......|       |      ||||  ::||.|.|.|    .|...|:||  .|        .|
Mouse   340 SPSCQPAC-------C------RPGSSASAICQPACPP----RTFYIPSSCKPPC--------SP 379

  Fly   525 YECVPSCRPRCENGRCSSPGHCECDPGHVVTNSSEPNSC--RPQCQEQCINAECVAPEKCACLPR 587
            ..|.|.|||.|.              |.:........|.  ||.|...|.:    ...:..||..
Mouse   380 VSCRPICRPICS--------------GPITFRQPYVTSITYRPACYRSCYS----ILRRPTCLAS 426

  Fly   588 YRFLPDSSTECEPICSKGCLSGQECVAPD 616
            |.:        .|:||:     |.|...|
Mouse   427 YSY--------RPVCSR-----QPCTDSD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC2NP_001285922.1 None
Krtap16-1NP_001242986.1 Repetitive region 4..8 1/1 (100%)
Repetitive region 58..62 1/11 (9%)
Keratin_B2_2 68..112 CDD:290596 19/73 (26%)
15 X 5 AA repeats of C-C-X(3) 73..307 81/331 (24%)
Keratin_B2 83..247 CDD:279797 59/241 (24%)
Keratin_B2_2 108..148 CDD:290596 16/60 (27%)
Keratin_B2_2 147..188 CDD:290596 12/51 (24%)
Keratin_B2_2 173..216 CDD:290596 16/64 (25%)
Keratin_B2 190..348 CDD:279797 48/197 (24%)
Keratin_B2_2 197..238 CDD:290596 14/59 (24%)
PMG <298..416 CDD:283053 44/157 (28%)
Keratin_B2_2 302..350 CDD:290596 15/61 (25%)
Repetitive region 347..351 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 435..502 3/13 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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