DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28a5 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_609694.1 Gene:Cyp28a5 / 34817 FlyBaseID:FBgn0028940 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:518 Identity:130/518 - (25%)
Similarity:234/518 - (45%) Gaps:81/518 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLVVGLLYAVLVWNYDYWRKRGVPGPKPKLLCGNYPNMFTMKRHAIYDLDDIY------RQYKNK 68
            |.:...:::..:|.:.:||:|||.||....:.|.:.|          .||:.:      |::..|
 Worm    10 SAIFVAVFSYYIWQWTFWRRRGVVGPMGFPVLGVFLN----------SLDNNFPFPLQCREWTKK 64

  Fly    69 YDAVGIFGSRSPQLLVI-NPALARRVFVSNFKNFH---------DNEIAKNIDEKTDFIFANNPF 123
            :..:..|...:.:.||| :|.|...|||:.:.||:         |:|..|.          .|.|
 Worm    65 FGKIYGFTEGTLKTLVISDPELVHEVFVTQYDNFYGRKRNPIQGDSEKEKR----------TNLF 119

  Fly   124 SLTGEKWKTRRADVTPGLTMGRIKTVYPVTNKVCQKLTEWVEKQLRLGSKDGIDAKHMSLCFTTE 188
            :..|.:||..||..:|..:...::.:|........:|...:|||...|.:  ||.......||.:
 Worm   120 AAQGFRWKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQ--IDMLKFYQEFTLD 182

  Fly   189 MVTDCVLG-LGAESFSDKPTPIMSKINDLFNQPWTFVLFFILTSSFPS-LSHLIK---LRFVPV- 247
            ::....:| ..::.|.:...||:||   ||.  ..|...|::...||: |..:|:   |:.:.| 
 Worm   183 VIGRIAMGQTDSQMFKNPIMPIVSK---LFQ--GNFAKLFLIGGIFPTFLVEIIRQILLKNLKVG 242

  Fly   248 ---DVERFFVDLMGSAVETRRAQLAAGKQF-ERSDFLDYIL--------QLGE------------ 288
               .:....:|.:.:.::.|......|.:. |.:||:|..|        ..||            
 Worm   243 SFRKINEITLDAIHNRIKQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYT 307

  Fly   289 KRNLDNRQLLAYSMTFLLDGFETTATVLAHILLNLGRNKEAQNLLREEIRSHLQDGTIAFEKLSD 353
            .|.|...:::.....||:.||:|||..|::....|..:.|.|..|:||:.....:..:..::||.
 Worm   308 NRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSK 372

  Fly   354 LPYLDACVQETIRLFPPG-FMSNKLCTESIEIPNKEGPNFVVEKGTTVVVPHYCFMLDEEFF-PN 416
            |.|::...:|.:||:|.| |.:::.|..:.::.|.:     ||.||.:.|..:....|...: .:
 Worm   373 LKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMK-----VEVGTMIQVDTWTLHTDPNIWGDD 432

  Fly   417 PQSFQPERFLEPDAAKTFRERGVFMGFGDGPRVCIGMRFATVQIKAAIVELISKFNVKINDKT 479
            .:.|:|||:..|::.:.:::.| ::.||.|||.|||||.|.::.|..:|.::.||..:...||
 Worm   433 AEDFKPERWQTPNSDQIYQKSG-YIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGAKT 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28a5NP_609694.1 p450 33..500 CDD:299894 123/495 (25%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 116/454 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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