DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28a5 and cyp-13A12

DIOPT Version :9

Sequence 1:NP_609694.1 Gene:Cyp28a5 / 34817 FlyBaseID:FBgn0028940 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:551 Identity:134/551 - (24%)
Similarity:250/551 - (45%) Gaps:88/551 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLITLTLVSLVVGLLYAVLVWNYDYWRKRGVPGPKPKLLCGNYPNMFTMKRHAIYDLDDIYRQY 65
            |.:|.|.:::.::|:| :..:|.:.||::||:.||....:.|:...|.:.:......|.:..:||
 Worm     1 MAIIFLAILTSIIGVL-SFYLWTWSYWKRRGIAGPSGYPILGSALEMLSSENPPYLQLKEWTKQY 64

  Fly    66 KNKYDAVGIFGSRSPQLLVINPALARRVFVSNFKNFHDNEI-----AKNIDEKTDFIFANNPFSL 125
            ...|   ||....|..|::.:|.|.:.|||..:.||...::     ..|.|::.      |.||.
 Worm    65 GKVY---GITEGLSRTLVISDPDLVQEVFVKQYDNFFGRKLNPIQGDPNKDKRV------NLFSS 120

  Fly   126 TGEKWKTRRADVTPGLTMGRIKTVYPVTNKVCQKLTEWVEKQLRLGSKDG---IDAKHMSLCFTT 187
            .|.:||..|...:|..:...::.:.....:...:|...:|:.     .||   ||.......||.
 Worm   121 QGHRWKRLRTISSPTFSNNSLRKLKTTVEECAVELLRHIEQH-----TDGGQPIDLLDFYQEFTL 180

  Fly   188 EMVTDCVLG-LGAESFSDKPTPIMSKINDLFNQ------------PWTFVLFFILTSSFPSLSHL 239
            :::....:| ..::.|.:   |::..:..:|.:            ||...:..::..|.|::   
 Worm   181 DVIGRIAMGQTDSQMFKN---PLLPYVRAVFGEPRKGLFLSGSLAPWIGPILRMVMFSLPNI--- 239

  Fly   240 IKLRFVPVDVERFFVDLMGSAVETRRAQLAAG-KQFERSDFLDYIL----------------QLG 287
              ::...|.|.|...:.:...|:.|.|...|| ...|..||:|..|                :.|
 Worm   240 --VKNPAVHVIRHTSNAVEQRVKLRMADEKAGIDPGEPQDFIDLFLDAKSDDVELENNEDFTKAG 302

  Fly   288 EK--RNLDNRQLLAYSMTFLLDGFETTATVLAHILLNLGRNKEAQNLLREEIRSHLQDGTIAFEK 350
            .|  |.|...:::.....||:.||:|||..|::....|..:.:.|..|:|||.....|..:.|::
 Worm   303 VKVTRQLTTEEIVGQCFVFLIAGFDTTALSLSYSSFLLATHPKVQKKLQEEIDRECADPEVTFDQ 367

  Fly   351 LSDLPYLDACVQETIRLFPPGFMSN-KLCTESIEIPNKEGPNFVVEKGTTVVVPHYCFMLDEEFF 414
            ||.|.|::..::||:|::|.|.::| :.|..:.:|.|.|     :::||.::...:....|:..:
 Worm   368 LSKLKYMECVIKETLRMYPLGALANSRCCMRATKIGNYE-----IDEGTNILCDTWTLHSDKSIW 427

  Fly   415 -PNPQSFQPERFLEPDAAKTFRERGVFMGFGDGPRVCIGMRFATVQIKAAIVELISKFNVKINDK 478
             .:.:.|:|||:...|  :.|.::|.::.||.|||.|||||.|.::.|..:..::.|:.:::.:|
 Worm   428 GEDAEEFKPERWESGD--EHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKYTLEVCNK 490

  Fly   479 TRKDNDYEPGQIITGLRG-------GIWLDL 502
            |         ||...|.|       .:||:|
 Worm   491 T---------QIPLKLIGSRTTQPESVWLNL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28a5NP_609694.1 p450 33..500 CDD:299894 121/515 (23%)
cyp-13A12NP_499705.1 p450 33..507 CDD:278495 121/511 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.