DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Tnfrsf21

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_848704.1 Gene:Tnfrsf21 / 94185 MGIID:2151075 Length:655 Species:Mus musculus


Alignment Length:446 Identity:88/446 - (19%)
Similarity:133/446 - (29%) Gaps:173/446 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 VCECENGYAGDDGGTNCR----PVCSTCP-------ENGL-----CLSP---------------- 259
            |..|:...||.....:|.    .|||:||       |||:     |..|                
Mouse    64 VLTCDKCPAGTYVSEHCTNMSLRVCSSCPAGTFTRHENGIERCHDCSQPCPWPMIERLPCAALTD 128

  Fly   260 GVCVCKPGYVMRNDLCQPHCEKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNG-FCF 323
            ..|:|.||....|..|.||             ..|....|....|.:.:.| :| |.|..| |..
Mouse   129 RECICPPGMYQSNGTCAPH-------------TVCPVGWGVRKKGTENEDV-RC-KQCARGTFSD 178

  Fly   324 APETCVCSIGYQMGPNQVCEPKCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNG 388
            .|.:.:               ||.   .|..|.........||.:..||                
Mouse   179 VPSSVM---------------KCK---AHTDCLGQNLEVVKPGTKETDN---------------- 209

  Fly   389 HCVAPNFCICHDGYQLNSTNPVTSMCQPICKGCQFGDCVAPNVCECNVGYENINGLCELQTTTDS 453
                    :|......:||||.:|                                   .|.|.|
Mouse   210 --------VCGMRLFFSSTNPPSS-----------------------------------GTVTFS 231

  Fly   454 YEYSTTTVELQSSTVDPQLQTSTSEVPHSNCTAGCMCWIE---YDGMGTFNTAKCAKICVDPQDK 515
            :.....:.::.|||.:||...||.    ||.||.....:.   .:|....||:..:       .|
Mouse   232 HPEHMESHDVPSSTYEPQGMNSTD----SNSTASVRTKVPSGIEEGTVPDNTSSTS-------GK 285

  Fly   516 PCLN--LDNCQCDLSSGQLVCQEDSDMDYSGENSRYVCHILPEQ----GARSEAEVRIPDR---T 571
            ...|  |.|      ..|:..|:       ..:.|::..:||..    |.:|...::.|.|   .
Mouse   286 EGTNRTLPN------PPQVTHQQ-------APHHRHILKLLPSSMEATGEKSSTAIKAPKRGHPR 337

  Fly   572 GSSNK---------WMIIVGSCAGMIIGVAATIIGIKYYRRSTSRRNFEAEEAIVE 618
            .:::|         |||::..   :::.|...:..|:...|:..:...:...||||
Mouse   338 QNAHKHFDINEHLPWMIVLFL---LLVLVLIVVCSIRKSSRTLKKGPRQDPSAIVE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Tnfrsf21NP_848704.1 TNFR-Cys 1 50..88 5/23 (22%)
TNFRSF21 53..211 CDD:276909 41/203 (20%)
CRD1 67..88 CDD:276909 4/20 (20%)
TNFR-Cys 2 90..131 7/40 (18%)
CRD2 91..131 CDD:276909 7/39 (18%)
CRD3 133..186 CDD:276909 17/82 (21%)
TNFR-Cys 3 133..167 11/47 (23%)
TNFR-Cys 4 170..211 12/82 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..305 25/141 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..339 4/20 (20%)
Death_TNFRSF21 414..497 CDD:176756
DD 594..654 CDD:301326
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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