DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and megf10

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001072726.1 Gene:megf10 / 780183 XenbaseID:XB-GENE-491974 Length:1114 Species:Xenopus tropicalis


Alignment Length:894 Identity:207/894 - (23%)
Similarity:279/894 - (31%) Gaps:360/894 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GTSFAILRHGLNDCSHPESVPYNRKVLKSKLVPFQQYSY-----FHGWVTKYRHQYVYEDETAYR 77
            ||:.::.....|.|||.||  |:..|.:|...|:.|..|     ...|....||:..|  .||||
 Frog    20 GTTSSLNLEDPNVCSHWES--YSVTVQESYSHPYDQVYYTSCTDILNWFKCTRHRISY--RTAYR 80

  Fly    78 ----TVMR--PSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPT---- 132
                |:.|  ..||.|:..|.|.|.|.|..:| .||.|.:||||.|..|:||.:|...|..    
 Frog    81 RGEKTMYRRKSQCCPGFYESREMCVPHCADKC-VHGRCIAPNTCQCEPGWGGPNCSSACDVDHWG 144

  Fly   133 -------VCGKNEFCDR-PGVCSCQNGYK---------RTSPSDNCLPVCEKECGHHSFCSE-PG 179
                   .|.....|:. .|.|.|.:|||         :.:..::|...|  :|.:.:.|.. .|
 Frog   145 PHCSSRCQCKNGALCNPITGACHCSSGYKGWRCEERCDQGTYGNDCQQKC--QCQNGASCDHVTG 207

  Fly   180 KCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICP-----KDCGQNSRCVRPGV-------CECEN 232
            :|.|.|||                :...|..:||     ..|.:...|...||       |.|..
 Frog   208 ECRCPPGY----------------TGAFCEDLCPPGKHGSQCEERCPCQNGGVCHHVTGECSCPA 256

  Fly   233 GYAG-------DDG--GTNCRPVCSTCPENGLCLS-PGVCVCKPGYVMRNDLCQPHCE------K 281
            |:.|       .:|  |.||...|. |...|.|.| .|.|.|.|||  ..:.||..|.      |
 Frog   257 GWMGTVCGQPCPEGRYGRNCSQECQ-CHNGGTCDSATGQCYCSPGY--NGERCQEECPVGLYGVK 318

  Fly   282 CSDNAHCVAPNQCE-------CFPGYE---------SSG-----ADKKCVP-------------- 311
            |:....|:...:|.       |.|||.         |.|     .|||| |              
 Frog   319 CAQTCQCLNGGKCYHISGACLCEPGYTGERCETPLCSEGTYGMKCDKKC-PCHLQYTQSCHPMSG 382

  Fly   312 -----------KCSKGCTNGF--------CFAPE---------TCVCSIGY-------------- 334
                       .|::.|:.||        |....         .|:|:.|:              
 Frog   383 ECACKPGRSGLYCNETCSLGFYGEFCQQICSCQNGADCDSVTGKCICAPGFTGVDCSTACPPGTY 447

  Fly   335 --------QMGPNQVCEP--------------KCSLNCVHG----------KCTS-------PET 360
                    ....|.||.|              .||:||..|          :|.:       ..|
 Frog   448 GVNCSSLCNCKNNAVCSPVDGSCTCKAGWHGVDCSINCPRGSWGLGCNLTCQCLNGGACNPLDGT 512

  Fly   361 CTCDPGYR-FK------------------DNSHHE-------------------CDPICDSG--- 384
            |||.||:| .|                  |.||.:                   ||.:|..|   
 Frog   513 CTCAPGWRGLKCELPCQDGTYGMNCIERCDCSHADGCHPATGYCRCLAGWAGMHCDSVCPGGHWG 577

  Fly   385 --------CSNGHCVAPN--FCICHDGYQLNSTNPVTSMCQPICKGCQFG--------DCVAPN- 430
                    |.||...:|:  .|.|..||:       .:.||.||....:|        .||..| 
 Frog   578 PNCSLSCDCKNGASCSPDDGICECAPGYR-------GTTCQRICSPGFYGHRCSQACPQCVHSNG 635

  Fly   431 -------VCECNVGY---------------ENINGLC---------ELQTTTDSYEYSTTTVELQ 464
                   .|:|..|:               :|..|:|         .:..|...|   ...:...
 Frog   636 PCHHVTGQCDCLAGFMGSLCNEVCPSGRYGKNCAGVCACTNNGTCNPIDGTCQCY---PGWIGND 697

  Fly   465 SSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDG--------MGTFNTAKCAKICVDPQDKPCLNLD 521
            .|...|......:.:...||..|..| ..|||        .|.:.|.:|.   :....|.|..:.
 Frog   698 CSQACPPGHWGPNCIHTCNCHNGAYC-SAYDGECKCSPGWTGLYCTQRCP---LGYYGKECTLVC 758

  Fly   522 NCQ----CDLSSGQLVC----------QEDSDMDYSGENSRYVCHILPE---------------- 556
            .||    ||..:||..|          |:.....| |...|.||..|..                
 Frog   759 QCQNGADCDHITGQCTCRTGFMGKFCEQKCPSASY-GYGCRQVCDCLNNSTCDHITGTCYCSPGW 822

  Fly   557 QGARSEAEVRIP-------DRTGS---SNKWMIIVGSCAGMIIGVAATI 595
            :|||.:..|.|.       .||.:   ::.:.|  |:.||:||.|...:
 Frog   823 KGARCDQAVMIVVGNLNSLSRTSAAIPADSYQI--GAIAGIIILVLVVL 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
megf10NP_001072726.1 EMI 30..99 CDD:462204 25/72 (35%)

Return to query results.
Submit another query.