DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and tnfaip6

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001035333.2 Gene:tnfaip6 / 678516 ZFINID:ZDB-GENE-060421-2654 Length:271 Species:Danio rerio


Alignment Length:187 Identity:44/187 - (23%)
Similarity:64/187 - (34%) Gaps:50/187 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ESVPYNRKVLKSKLVPFQQYSYFHGWVTKYRHQYVYEDETAYRTVMRPSCCEGYEGSVENCKPVC 99
            |:..|...:|.:.:...|....:|....|.|:|..|::..|        .|....|::.....: 
Zfish    26 EAWGYKNGILHNSIWLEQAAGVYHRESRKGRYQLTYKEAKA--------VCNFEGGTLATFDQL- 81

  Fly   100 RQQCPQHGF--CSSPNTCSCNAGYGGIDCHPVCPTV-CGKNEFCDRPGVCSCQNGYKRTSPSDN- 160
             :...|.||  |::........||         |.| .|.|  |....|.....|| |.:.|:. 
Zfish    82 -EAARQIGFHVCAAGWLDKGRVGY---------PIVKAGSN--CGFGKVGIIDYGY-RLNKSERW 133

  Fly   161 ---CLPVCEKECG--HHSFCSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPIC 212
               |.....||||  |    ::|.|....|||         ||.|::..      ||
Zfish   134 DVYCYNPVAKECGGVH----TDPEKVLVSPGY---------PDEYQDEQ------IC 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
tnfaip6NP_001035333.2 Link_domain_TSG_6_like 46..138 CDD:239592 24/113 (21%)
CUB 145..254 CDD:395345 13/46 (28%)

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