DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Esm1

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_072126.1 Gene:Esm1 / 64536 RGDID:71013 Length:184 Species:Rattus norvegicus


Alignment Length:231 Identity:48/231 - (20%)
Similarity:63/231 - (27%) Gaps:110/231 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VLKSKLVPFQQYSYFH---GWVTKYRHQYVYEDETAYRTVMRPSCCEGYE-GSVENCKPVCRQQC 103
            :|.:.|:|      .|   .|..||             .|..|..|:..| .|...||......|
  Rat     6 LLTTLLIP------LHLGMAWSAKY-------------AVDCPEHCDNTECRSSLRCKRTVLDDC 51

  Fly   104 PQHGFCSSPNTCSCNAGYG-----------GIDCHP--VCPTVCGKNEFCDRPGVCSCQNGYKRT 155
               |.|.     .|.||.|           |:.|.|  .|.....:::|.|..|||         
  Rat    52 ---GCCQ-----VCAAGPGETCYRTVSGMDGVKCGPGLKCHFYSEEDDFGDEFGVC--------- 99

  Fly   156 SPSDNCLPVCEKECGHHSF---CSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCG 217
                       |:|.:.:|   |.|  .|.|:.|                        ||.:..|
  Rat   100 -----------KDCPYGTFGMDCKE--TCNCQSG------------------------ICDRVTG 127

  Fly   218 QNSRCV--------------RPGVCECENGYAGDDG 239
               ||:              |....:.|...|..||
  Rat   128 ---RCLDFPFFQYAAAKSPSRTSASQTERDAASGDG 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Esm1NP_072126.1 IGFBP 28..83 CDD:459717 16/62 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..184 5/16 (31%)

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