DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and pear1

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:863 Identity:209/863 - (24%)
Similarity:278/863 - (32%) Gaps:321/863 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FSLHFVC-LSLSFGTSFAILRHGLNDCSHPESVPYNRKVLKSKLVPFQQYS---YFHGWVTK--Y 64
            |.|..|| ||||...      ...|.||..||  :...|.:|...||.|.|   ....|...  .
Zfish    11 FVLGCVCELSLSLDP------RDPNVCSLWES--FTTSVKESYAQPFDQMSEEPCSEPWSANKCT 67

  Fly    65 RHQYVYEDETAYRTVM------RPSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCN----- 118
            ||:..|  :|.||.|:      |..||.|:..|...|.|.|.::| .||.|.:|:.|.|.     
Zfish    68 RHRITY--KTLYRQVVKMDYRRRYQCCPGFYESRNKCVPRCTKEC-VHGRCVAPDRCQCEMGWRG 129

  Fly   119 --------------------------------------AGYGGIDCHPVCPT-----------VC 134
                                                  |||.|..||..||.           .|
Zfish   130 DDCSSSCDGQHWGPGCRRLCECQNGGECDVLTGNCQCPAGYTGQHCHDPCPVKWFGQGCRQECQC 194

  Fly   135 GKNEFCDR-PGVCSCQNGYKRT---------------SPSDN---------CL-------PVCEK 167
            |....|:: .|.|.|:.|:..|               .|..|         ||       |||.:
Zfish   195 GTGGICNQTTGECVCKQGFTGTLCEESCPRPKRCAARCPCQNGGICQGNGVCLCPPGWMGPVCTE 259

  Fly   168 ECGHHSF---CS-------------EPGKCECEPGY------EKVGNGTVFPDGYKNNSNGNCSP 210
            .|....|   ||             |.|:|:|:.||      |:...||...|         |..
Zfish   260 RCPPGRFGINCSKDCLCHNGGHCDQEKGQCQCDAGYTGERCNEECPVGTYGED---------CKG 315

  Fly   211 ICPKDCGQNSRCVR-PGVCECENGYAGDD----------GGTNCRPVCSTCPENGLCLSP--GVC 262
            :|  ||...:||.. .|.|.||.|:.|..          .|.:|:..|...|.|.|...|  |.|
Zfish   316 VC--DCANGARCYNIHGGCLCEPGFKGPRCDHRMCPEAVFGMHCQHRCLCNPLNTLSCHPLKGEC 378

  Fly   263 VCKPGY--VMRNDLCQP--HCEKCSDNAHCV-------APNQCECFPGY---------ESSGADK 307
            .|:||:  :..|:.|..  :...|.:...||       ...||.|.||:         |.....|
Zfish   379 TCQPGWAGLYCNETCAQGYYGNGCLEPCLCVNGGVCDSVTGQCHCPPGFTGLHCEKLCEDGFYGK 443

  Fly   308 KCVPKCSKGCTNGFCFAP--ETCVCSIGYQMGPNQVCEPKCSLNCVHG----------KCT---- 356
            .|:..|.  |.|....:|  ..|:|..|:: ||:      ||:.|..|          |||    
Zfish   444 GCLSACK--CVNSIVCSPVDGACICKEGWR-GPD------CSIACSEGTWGPGCNRTCKCTNGAS 499

  Fly   357 ---SPETCTCDPGYR------------FKDNSHHECDPICDSGCSN--GHCVAPNFCI------- 397
               :..:|.|..|:|            |.....::||.:.|.||.:  |.|:    |:       
Zfish   500 CDPADGSCKCTAGWRGASCDEPCLIGTFGPGCQNQCDCVHDEGCESVTGQCL----CLPGWTGVR 560

  Fly   398 ----CHD---GYQLNST----NPVT----------------SMCQPICKGCQFGD--------CV 427
                |.:   |.|.|.|    |..|                :.||.:|....||:        ||
Zfish   561 CTQQCPEGTWGIQCNQTCSCLNSATCQAHTGTCLCKPGFWGAQCQHMCSAGLFGEKCSRHCPPCV 625

  Fly   428 APNV-------CECNVGYENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCT 485
            ..:.       |:|..||  ...|||.......|....:.|...::..     |...||....|.
Zfish   626 HASSCHHITGDCQCLSGY--TGPLCEQACPVGRYGSHCSNVCRCTNNA-----TCHHEVGLCICP 683

  Fly   486 AGCMCWIEYD-----GMGTFNTAKCAKICVDPQDKPCLNLDNCQCDLSSGQLVCQEDSDMDYSGE 545
            ||   |...|     ..|||. ..||:.|..|        .|..||..:|..||:..     .||
Zfish   684 AG---WTGSDCSLLCQAGTFG-INCAQTCSCP--------PNHSCDPHNGDCVCEPG-----PGE 731

  Fly   546 NSRYVCHILPEQGARSEAEVRIPDRTGSSNKWMIIVGSCAGMIIGVAATIIGIKYYRRS------ 604
            ..:      |||    |..|.:|......:.|..|.|....:|:.|....:.:.|.||.      
Zfish   732 ACK------PEQ----ELSVMVPVSPVERDSWGAIAGIVVLVILVVLLLAVLLLYRRRQQDKQSN 786

  Fly   605 ------TSRRNFEAEEAI 616
                  :|.|...:|.|:
Zfish   787 TPVVSFSSTRTVSSEYAV 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
pear1XP_700533.4 EMI 29..96 CDD:284877 23/70 (33%)
Laminin_EGF 411..451 CDD:278482 9/41 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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