DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and pear1

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:863 Identity:209/863 - (24%)
Similarity:278/863 - (32%) Gaps:321/863 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FSLHFVC-LSLSFGTSFAILRHGLNDCSHPESVPYNRKVLKSKLVPFQQYS---YFHGWVTK--Y 64
            |.|..|| ||||...      ...|.||..||  :...|.:|...||.|.|   ....|...  .
Zfish    11 FVLGCVCELSLSLDP------RDPNVCSLWES--FTTSVKESYAQPFDQMSEEPCSEPWSANKCT 67

  Fly    65 RHQYVYEDETAYRTVM------RPSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCN----- 118
            ||:..|  :|.||.|:      |..||.|:..|...|.|.|.::| .||.|.:|:.|.|.     
Zfish    68 RHRITY--KTLYRQVVKMDYRRRYQCCPGFYESRNKCVPRCTKEC-VHGRCVAPDRCQCEMGWRG 129

  Fly   119 --------------------------------------AGYGGIDCHPVCPT-----------VC 134
                                                  |||.|..||..||.           .|
Zfish   130 DDCSSSCDGQHWGPGCRRLCECQNGGECDVLTGNCQCPAGYTGQHCHDPCPVKWFGQGCRQECQC 194

  Fly   135 GKNEFCDR-PGVCSCQNGYKRT---------------SPSDN---------CL-------PVCEK 167
            |....|:: .|.|.|:.|:..|               .|..|         ||       |||.:
Zfish   195 GTGGICNQTTGECVCKQGFTGTLCEESCPRPKRCAARCPCQNGGICQGNGVCLCPPGWMGPVCTE 259

  Fly   168 ECGHHSF---CS-------------EPGKCECEPGY------EKVGNGTVFPDGYKNNSNGNCSP 210
            .|....|   ||             |.|:|:|:.||      |:...||...|         |..
Zfish   260 RCPPGRFGINCSKDCLCHNGGHCDQEKGQCQCDAGYTGERCNEECPVGTYGED---------CKG 315

  Fly   211 ICPKDCGQNSRCVR-PGVCECENGYAGDD----------GGTNCRPVCSTCPENGLCLSP--GVC 262
            :|  ||...:||.. .|.|.||.|:.|..          .|.:|:..|...|.|.|...|  |.|
Zfish   316 VC--DCANGARCYNIHGGCLCEPGFKGPRCDHRMCPEAVFGMHCQHRCLCNPLNTLSCHPLKGEC 378

  Fly   263 VCKPGY--VMRNDLCQP--HCEKCSDNAHCV-------APNQCECFPGY---------ESSGADK 307
            .|:||:  :..|:.|..  :...|.:...||       ...||.|.||:         |.....|
Zfish   379 TCQPGWAGLYCNETCAQGYYGNGCLEPCLCVNGGVCDSVTGQCHCPPGFTGLHCEKLCEDGFYGK 443

  Fly   308 KCVPKCSKGCTNGFCFAP--ETCVCSIGYQMGPNQVCEPKCSLNCVHG----------KCT---- 356
            .|:..|.  |.|....:|  ..|:|..|:: ||:      ||:.|..|          |||    
Zfish   444 GCLSACK--CVNSIVCSPVDGACICKEGWR-GPD------CSIACSEGTWGPGCNRTCKCTNGAS 499

  Fly   357 ---SPETCTCDPGYR------------FKDNSHHECDPICDSGCSN--GHCVAPNFCI------- 397
               :..:|.|..|:|            |.....::||.:.|.||.:  |.|:    |:       
Zfish   500 CDPADGSCKCTAGWRGASCDEPCLIGTFGPGCQNQCDCVHDEGCESVTGQCL----CLPGWTGVR 560

  Fly   398 ----CHD---GYQLNST----NPVT----------------SMCQPICKGCQFGD--------CV 427
                |.:   |.|.|.|    |..|                :.||.:|....||:        ||
Zfish   561 CTQQCPEGTWGIQCNQTCSCLNSATCQAHTGTCLCKPGFWGAQCQHMCSAGLFGEKCSRHCPPCV 625

  Fly   428 APNV-------CECNVGYENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCT 485
            ..:.       |:|..||  ...|||.......|....:.|...::..     |...||....|.
Zfish   626 HASSCHHITGDCQCLSGY--TGPLCEQACPVGRYGSHCSNVCRCTNNA-----TCHHEVGLCICP 683

  Fly   486 AGCMCWIEYD-----GMGTFNTAKCAKICVDPQDKPCLNLDNCQCDLSSGQLVCQEDSDMDYSGE 545
            ||   |...|     ..|||. ..||:.|..|        .|..||..:|..||:..     .||
Zfish   684 AG---WTGSDCSLLCQAGTFG-INCAQTCSCP--------PNHSCDPHNGDCVCEPG-----PGE 731

  Fly   546 NSRYVCHILPEQGARSEAEVRIPDRTGSSNKWMIIVGSCAGMIIGVAATIIGIKYYRRS------ 604
            ..:      |||    |..|.:|......:.|..|.|....:|:.|....:.:.|.||.      
Zfish   732 ACK------PEQ----ELSVMVPVSPVERDSWGAIAGIVVLVILVVLLLAVLLLYRRRQQDKQSN 786

  Fly   605 ------TSRRNFEAEEAI 616
                  :|.|...:|.|:
Zfish   787 TPVVSFSSTRTVSSEYAV 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
pear1XP_700533.4 EMI 28..97 CDD:462204 23/72 (32%)
Laminin_EGF 411..451 CDD:395007 9/41 (22%)

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