DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and megf10

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_001922524.2 Gene:megf10 / 564571 ZFINID:ZDB-GENE-080506-1 Length:1120 Species:Danio rerio


Alignment Length:768 Identity:195/768 - (25%)
Similarity:255/768 - (33%) Gaps:283/768 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NDCSHPESVPYNRKVLKSKLVPFQQYSY-----FHGWVTKYRHQYVYEDETAYR----TVMR--P 82
            |.|||.||  |:..|.::...||.|..|     ...|....:|:..|  .||||    |:.|  .
Zfish    29 NVCSHWES--YSVTVQETYAHPFDQIYYTSCTDILNWFKCTQHRVSY--RTAYRRGEKTMHRRKS 89

  Fly    83 SCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCH---------PVCPTVCG-KN 137
            .||.|:..|.:.|.|.|.::| .||.|.:||||.|..|:||.||.         |.|.:.|. ||
Zfish    90 QCCPGFYESGDICVPHCAEKC-VHGRCVAPNTCQCEPGWGGADCSSACDRDHWGPHCSSRCQCKN 153

  Fly   138 EFCDRP--GVCSCQNGY---------KRTSPSDNCLPVCEKECGHHSFCSE-PGKCECEPGYE-- 188
            |....|  |.|.|..||         ..::..:||...|  .|.:::.|.. .|:|.|.|||.  
Zfish   154 EALCNPITGACICAPGYHGWRCEDLCDHSTYGNNCQQKC--LCQNNATCHHITGECVCSPGYTGA 216

  Fly   189 ---------KVG----------NGTV---------FPDGY---------------KN-------N 203
                     |.|          ||.|         .|.|:               ||       :
Zfish   217 FCEDLCPPGKHGQQCEERCPCQNGGVCHHVTGECSCPAGWMGMVCGQPCPTGRFGKNCSQECQCH 281

  Fly   204 SNGNCSP-----ICPK------------------DCGQNSRCVR-------PGVCECENGYAGD- 237
            :.|.|||     :|..                  .|.|..|||.       .|.|.||.||.|: 
Zfish   282 NGGICSPSTGQCVCSSGYTGERCQDQCQVGTYGIGCSQACRCVNGAQCYHVSGACLCEQGYTGES 346

  Fly   238 -------DG--GTNCRPVCSTCPENGLCLSP--GVCVCKPGY--VMRNDLCQP-----HCE---K 281
                   ||  |..|...|.....|.....|  |.|.|:.|:  :..|:.|.|     .|:   :
Zfish   347 CEERICPDGQYGLKCDRKCPCNTNNTRSCHPMSGECSCQSGWSGLYCNETCAPGFYGEACQEVCR 411

  Fly   282 CSDNAHC-VAPNQCECFPGYESSGADKKCVP-----KCSK--GCTNGFCFAP--ETCVCSIGYQM 336
            |.:.|.| ....:|.|.|||:.|.....|.|     .|:.  .|.||...:|  .:|.|..|:..
Zfish   412 CQNGADCHSVSGECICAPGYKGSDCAIACPPGTYGINCTSLCSCKNGAICSPIDGSCSCQAGWHG 476

  Fly   337 GPNQVCEPK------CSLNCV---HGKCTSPE-TCTCDPGYRFKDNSHH--------ECDPICD- 382
            ....:..|.      |:|:||   .|.|.:.: .|||.||:|......|        :|...|| 
Zfish   477 VDCSINCPSGTWGLGCNLSCVCGNGGACNALDGKCTCTPGWRGDRCDQHCQDGTYGLDCRERCDC 541

  Fly   383 ---SGC--SNGHC-------------------VAPN------------------FCICHDGYQLN 405
               .||  |.|||                   ..||                  .|.|..|::  
Zfish   542 SHADGCHPSTGHCRCLAGWTGIHCDSVCAEGRWGPNCSLSCNCKNSASCSPDEGACECAPGFR-- 604

  Fly   406 STNPVTSMCQPICKGCQFG--------DCVAPN--------VCECNVGY---------------E 439
                 .:.||.||....||        .||..|        .|||..|:               :
Zfish   605 -----GTTCQHICSPGVFGHRCSQACPHCVHSNGPCHHVTGQCECLPGFKGALCNEVCPSGKFGK 664

  Fly   440 NINGLCELQTTTDSYEYSTTTVELQ---------SSTVDPQLQTSTSEVPHSNCTAGCMCWIEYD 495
            |..|.|   |.|::...|......|         .|...|..|...:.:...||..|..| ..||
Zfish   665 NCGGSC---TCTNNGTCSPMDGSCQCYPGWIGSDCSQPCPPGQWGPNCIHTCNCHNGAFC-SAYD 725

  Fly   496 G--------MGTFNTAKC-----AKICVDPQDKPCLNLDNCQCDLSSGQLVCQ 535
            |        .|.:.|.:|     .|.||    :.|...:...|:..|||..|:
Zfish   726 GECKCTAGWTGLYCTQRCPLGFYGKDCV----QACQCENGADCNHISGQCTCR 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
megf10XP_001922524.2 EMI 29..96 CDD:284877 24/70 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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