DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and megf11

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_009291879.1 Gene:megf11 / 563468 ZFINID:ZDB-GENE-060503-252 Length:1114 Species:Danio rerio


Alignment Length:791 Identity:203/791 - (25%)
Similarity:261/791 - (32%) Gaps:281/791 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NDCSHPESVPYNRKVLKSKLVPFQQYSYFH-----GWVTKYRHQYVYEDETAYRTVM------RP 82
            |.|||.||  |...|.:|...||.|..|..     .|....||:..|  :||||..:      |.
Zfish    32 NVCSHWES--YAVTVQESYAHPFDQIYYTRCTDILNWFKCTRHRTSY--KTAYRRGVRTMYRRRS 92

  Fly    83 SCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCH---------PVCPTVCG-KN 137
            .||.||..|.:.|.|.|.::| .||.|.||:||.|..|:||:||.         |.|...|. ||
Zfish    93 QCCPGYFESGDLCVPRCSEEC-AHGRCVSPDTCQCEPGWGGLDCSSGCESGYWGPHCSNRCQCKN 156

  Fly   138 EFCDRP--GVCSCQNGYKRTSPSDNCLP-----VCEKECG-------HHSFCSEPGKCECEPGYE 188
            .....|  |.|.|.:||:.....|.|.|     .|:.:|.       ||    |.|:|.|.||| 
Zfish   157 GALCNPITGACVCTDGYQGWRCEDLCEPGYYGKGCQLQCQCLNGATCHH----ETGECICAPGY- 216

  Fly   189 KVGNGTVFPDGYKNNSNG-NCSPICPKDCGQNSRCVR-PGVCECENGYAGD---------DGGTN 242
               .|.:..:...:.|:| .|...||  |.....|.. .|.|.|..|:.|.         ..|.|
Zfish   217 ---MGPICGERCPSGSHGPQCEQRCP--CQNGGTCHHITGECSCPAGWTGSVCAQPCPFGKYGIN 276

  Fly   243 CRPVCSTCPENGLC-LSPGVCVCKPGYVMRNDLCQP-------------HCEKCSDNAHCVAPN- 292
            |...|| |...||| ...|.|.|..||  ....||.             ||: |.:.|.|...| 
Zfish   277 CSKECS-CRNGGLCDHITGQCQCMAGY--SGHRCQEECPVGTYGPQCTLHCD-CQNGAKCYHING 337

  Fly   293 QCECFPGYESSGA-DKKCVPK-----CSKGC----TNGFCFAPET--CVCSIGYQ-MGPNQVCEP 344
            .|.|..|::.... |:.|.|.     |.|.|    ||.....|.|  |.|:.|:. :..|:.|.|
Zfish   338 ACLCDTGFKGHHCQDRFCPPGLYGLICDKYCPCNSTNTISCHPLTGECSCTAGWTGLYCNETCPP 402

  Fly   345 -----KCSL--NCVHG-KCTS-PETCTCDPGYRFKDNSHHECDPICDSG-----------CSNGH 389
                 .|.:  .|.:| .|.| ...|.|.|||...|     |...|.||           |.|..
Zfish   403 GYYGEGCGVPCQCANGADCHSLTGACICAPGYTGDD-----CSQTCPSGLFGTNCTSICHCHNQA 462

  Fly   390 CVAP--NFCICHDGYQ----------------LNST---------NPVTSMC------------Q 415
            ..:|  ..|||.:|:|                .|.|         :|:...|            |
Zfish   463 SCSPIDGSCICKEGWQGVDCSILCSSGTWGLGCNQTCLCANGAACDPIDGSCTCSSGWRGERCQQ 527

  Fly   416 PICKGCQFGDCVAPNVCECN--VGYENINGLC--------------------------------- 445
            |...|....:|  ...|:||  .|.::::|||                                 
Zfish   528 PCPDGTYELEC--RERCDCNHADGCDHVSGLCRCLPGWTGIHCDSICPQGFWGSNCSMTCSCQNG 590

  Fly   446 -----ELQTTTDSYEYSTTTVEL---------QSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDG 496
                 |..|...:..|..|:.:.         :.|.:.||...||.  |..:.|..|.|...:.|
Zfish   591 GSCSPEDGTCVCAPGYRGTSCKRICPPGFYGHRCSQLCPQCVHSTG--PCHHVTGHCECLAGFFG 653

  Fly   497 --------MGTFNTAKCAKICV-------DPQD------------------------KPCLNLDN 522
                    .|.|..| ||:||:       :|.|                        ..|||..|
Zfish   654 SLCNQVCPSGKFGKA-CAEICLCTNNGTCNPIDGSCQCFPGWTGDDCSQICPIGQWGPDCLNSCN 717

  Fly   523 C----QCDLSSGQ---------LVCQEDSDMDYSGENSRYVCHILPEQGARSEAEVRIPDRTGSS 574
            |    ||....|:         |.|.:.....:.|.:...||..  :.||..:.           
Zfish   718 CHNGAQCSAYDGECRCSLGWTGLYCTQRCPSGFYGRDCAEVCRC--QNGADCDH----------- 769

  Fly   575 NKWMIIVGSCA 585
                 |.|.||
Zfish   770 -----ITGQCA 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
megf11XP_009291879.1 EMI 32..98 CDD:311482 24/69 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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