DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Dkk4

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001102802.1 Gene:Dkk4 / 502097 RGDID:1563172 Length:221 Species:Rattus norvegicus


Alignment Length:227 Identity:46/227 - (20%)
Similarity:67/227 - (29%) Gaps:74/227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 CSPICP--------------KDCGQNSRCVRPGVCE----C-----ENGYAGDDGGTNCRPVCST 249
            |||:..              :..|:.|:||....|.    |     |..:.     ..||.|...
  Rat    13 CSPLGALVLDFNNIKSSSDVQGSGKGSQCVSDKDCNVGKFCFALHDERSFC-----ATCRRVRRR 72

  Fly   250 CPENGLCLSPGVCVCKPGYVMRNDLC------QPHCEKCSDNAHCVAPNQCECFPGYESSGADKK 308
            |..:.:|....|||        ||:|      :|..::.:|............:|..|:....|.
  Rat    73 CQRSAMCCPGTVCV--------NDVCTAVENTRPVMDRNTDGQDGTYAEGTTKWPAEENRPQGKP 129

  Fly   309 CVPK--CSKGCTNGFCFAPETCVCSIGYQMGP---------NQVCEP------KCSLNCVHGKCT 356
            ...|  .:||.....|.....|        ||         .::|:|      .||.........
  Rat   130 STKKSQSNKGQEGESCLRTSDC--------GPGLCCARHFWTKICKPVLLEGQVCSRRGHKDTAQ 186

  Fly   357 SPE---TCTCDPGYRFKD----NSHHECDPIC 381
            :||   .|.|.||...:.    |..|....:|
  Rat   187 APEIFQRCDCGPGLSCRSQVTGNRQHTRLRVC 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Dkk4NP_001102802.1 Dickkopf_N 41..91 CDD:282549 15/62 (24%)
Prokineticin <145..202 CDD:148298 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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