DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and NimC4

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster


Alignment Length:318 Identity:97/318 - (30%)
Similarity:138/318 - (43%) Gaps:55/318 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 CSIGYQMGPNQVCEPKCSLNC-VHGKCTSPETCTCDPGY----RFKDNSHHECDPICDSGCSNG- 388
            |..||....:.:|||.||..| .|..|.:|:.|.|..||    ..:|.||: |:|||::.|..| 
  Fly    77 CCPGYLQVESGLCEPICSRGCPAHASCAAPDRCECISGYVSARNHQDGSHY-CEPICETPCPAGA 140

  Fly   389 HCVAPNFCICHDGY-QLNSTNP-VTSMCQPICK---GCQFGDCVAPNVCECNVGY--ENINGLC- 445
            .||.||.|.|.||| ||..|:. |:..|.|:|:   ||..|.|:..:.|.||.||  :.....| 
  Fly   141 QCVTPNTCACRDGYTQLQPTDDGVSGGCAPVCRVGDGCANGKCIDVDRCACNSGYRWDKAEERCI 205

  Fly   446 ELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDGMGTFNTAKCAKICV 510
            ||...:.|.|..||    :.:|..|. .:||:....::|.         |....|. .:|.:...
  Fly   206 ELSAESISEELETT----EDNTDSPS-TSSTAVFTATHCP---------DDFVLFR-GECREKQF 255

  Fly   511 DPQDKPCLNLDNC---QCDLSSGQLVCQEDSDMDYSGENSRYV-CH--ILPEQGARSEAEVRIPD 569
            |..|..||. ..|   |..|.||...|.:....:.|||.:..: |.  :|.:....:||    .|
  Fly   256 DSNDVGCLK-SGCGPHQTCLDSGVCQCSDGYVPEESGEATGVLSCRRTLLDQILGLNEA----ID 315

  Fly   570 RTGSSNKWMI-IVGSCAG-----MIIGVAATIIGIKYYRRSTSRRNFEAEEAIVECDF 621
            .....|.|.| |:|...|     :|:|:..   |.:|.:...:..|.|     :||.:
  Fly   316 DDDELNPWTIPIIGVACGFLFVLLIVGLLG---GRRYRQERAALANKE-----MECQY 365

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