DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and NimB5

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001188802.1 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster


Alignment Length:326 Identity:88/326 - (26%)
Similarity:112/326 - (34%) Gaps:125/326 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VTKYRHQYVYEDETAYRTVMRPSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGID 125
            |.||.:..|.:.:.|.|..:...||.||..|......|||.|                       
  Fly   107 VEKYSYPSVIQTDQANRLSLIEVCCTGYSASRLMGVTVCRAQ----------------------- 148

  Fly   126 CHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKV 190
                                |.||||                      .|..||:|||.      
  Fly   149 --------------------CGCQNG----------------------SCKIPGECECY------ 165

  Fly   191 GNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCECENGYAGDDGGTNCRPVCST-C---P 251
                   ||:..|.||:|...||..| ||.:|...|.|:|:.||..|:....|||:||: |   |
  Fly   166 -------DGFVRNDNGDCVFACPLGC-QNGQCYLDGSCQCDPGYKLDETRRFCRPICSSGCGSSP 222

  Fly   252 ENGLCLSPGVCVCKPGYVMRNDLCQPHCE-KCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSK 315
            .:. |..|.:|.|..||.:.:|.|||.|| .|.....|...|||:|.|||...            
  Fly   223 RHN-CTEPEICGCSKGYQLTDDGCQPVCEPDCGIGGLCKDNNQCDCAPGYNLR------------ 274

  Fly   316 GCTNGFCFAPETCVCSIGYQMGPNQVCEPKCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPI 380
                                   :.||:..|...|.:|.|.|...|.|||||     ::||...:
  Fly   275 -----------------------DGVCQADCYQKCNNGVCVSRNRCLCDPGY-----TYHEQSTM 311

  Fly   381 C 381
            |
  Fly   312 C 312



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16493at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24047
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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