DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Megf10

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001094127.1 Gene:Megf10 / 291445 RGDID:735084 Length:1145 Species:Rattus norvegicus


Alignment Length:919 Identity:213/919 - (23%)
Similarity:291/919 - (31%) Gaps:362/919 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CLSLSFGTSFAILRHGL-----------NDCSHPESVPYNRKVLKSKLVPFQQYSY-----FHGW 60
            ||    |...::|.|.|           |.|||.||  |:..|.:|...||.|..|     ...|
  Rat     8 CL----GLICSLLCHWLRAASSLNLEDPNVCSHWES--YSVTVQESYPHPFDQIYYTSCTDILNW 66

  Fly    61 VTKYRHQYVYEDETAYR----TVMR--PSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNA 119
            ....||:..|  .||||    |:.|  ..||.|:..|.:.|.|.|..:| .||.|.:||||.|..
  Rat    67 FKCTRHRVSY--RTAYRHGEKTMYRRKSQCCPGFYESRDVCVPHCADKC-VHGRCIAPNTCQCEP 128

  Fly   120 GYGGIDCH---------PVCPTVCG-KNEFCDRP--GVCSCQNGYKRTSPSDNCLP-----VCEK 167
            |:||.:|.         |.|.:.|. ||.....|  |.|.|..||:.....|.|..     .|.:
  Rat   129 GWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACHCAAGYRGWRCEDRCEQGTYGNDCHQ 193

  Fly   168 --ECGHHSFCSE-PGKCECEPGYE-----------KVG----------NGTV---------FPDG 199
              :|.:.:.|.. .|:|.|.|||.           |.|          ||.|         .|.|
  Rat   194 RCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSG 258

  Fly   200 YKNNSNGNCSPICP-----KDCGQNSRCVRPGVCE-------CENGYAGD---------DGGTNC 243
            :....   |...||     |:|.|..:|...|.|:       |..||.|:         ..|..|
  Rat   259 WMGTV---CGQPCPEGRFGKNCSQECQCHNGGACDAATGQCHCSPGYTGERCQDECPVGTYGVRC 320

  Fly   244 RPVCSTCPENGLC---------------------LSP--------------------------GV 261
            ...| .|...|.|                     |.|                          |.
  Rat   321 AETC-RCVNGGKCYHVSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLDNTHSCHPMSGE 384

  Fly   262 CVCKPGY--VMRNDLCQP-----HCEK---CSDNAHC-VAPNQCECFPGYESSGADKKCVP---- 311
            |.||||:  :..|:.|.|     .|::   |.:.|.| ....:|.|.||::.:.....| |    
  Rat   385 CGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVSGRCACAPGFKGTDCSTPC-PLGRY 448

  Fly   312 --KCSK--GCTNGFCFAP--ETCVCSIGYQMGPNQVCEPK------CSLNCV---HGKC-TSPET 360
              .||.  ||.|....:|  .:|:|..|:......:..|.      |:|.|.   .|.| |...|
  Rat   449 GINCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSISCPSGTWGFGCNLTCQCLNGGACNTLDGT 513

  Fly   361 CTCDPGYRFK-------------------DNSHHE-CDPI--------------CDSGCSNG--- 388
            |||.||:|.:                   |.||.: |.|.              |||.|:.|   
  Rat   514 CTCAPGWRGEKCEFPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWG 578

  Fly   389 -HCVAPNFC--------------------------ICHDGYQ-----------LNSTNP---VT- 411
             :|..|.:|                          ||..|:.           ::|:.|   :| 
  Rat   579 PNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITG 643

  Fly   412 ----------SMCQPICKGCQFG-DCVAPNVCECNVGYENINGLCE-LQTTTDSYEYSTTTVELQ 464
                      ::|..:|...:|| :|.  .||.|     ..||.|. :..:...|   ...:...
  Rat   644 LCDCLPGFTGALCNEVCPSGRFGKNCA--GVCTC-----TNNGTCNPIDRSCQCY---PGWIGSD 698

  Fly   465 SSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDG--------MGTFNTAKCAKICVDPQDKPCLNLD 521
            .|...|......:.:...||..|..| ..|||        .|.:.|.:|.   :....|.|..:.
  Rat   699 CSQPCPPAHWGPNCIHTCNCHNGAFC-SAYDGECKCTPGWTGLYCTQRCP---LGFYGKDCALVC 759

  Fly   522 NCQ----CDLSSGQLV---------CQEDSDMDYSGENSRYVCHILPE----------------Q 557
            .||    ||..|||..         |::.......|...|.:|..|..                :
  Rat   760 QCQNGADCDHISGQCTCRTGFMGRHCEQKCPAGTYGYGCRQICDCLNNSTCDHITGTCYCSPGWK 824

  Fly   558 GARSEAEVRIPDRTGSSNKWMIIVGSC----------------AGMIIGVAATIIGIKY------ 600
            |||.       |:.|     :||||:.                .|.|.|:...::.:.:      
  Rat   825 GARC-------DQAG-----VIIVGNLNSLSRTSTALPADSYQIGAIAGIVVLLLVVLFLLALFV 877

  Fly   601 -YRRSTSRR 608
             ||....|:
  Rat   878 IYRHKQKRK 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Megf10NP_001094127.1 EMI 31..100 CDD:462204 26/72 (36%)
EGF_Lam 281..318 CDD:214543 7/36 (19%)
EGF_CA 542..587 CDD:473889 12/44 (27%)

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