Protein Alignment NimC1 and Scarf2

DIOPT Version :10

• Sequence 1: NP_001260453.1
• Gene: NimC1 / 34816
• FlyBaseID: FBgn0259896
• Length: 622
• Species: Drosophila melanogaster
• Sequence 2: XP_038944006.1
• Gene: Scarf2 / 287949
• RGDID: 1306013
• Length: 838
• Species: Rattus norvegicus
• Alignment Length: 538
• Identity: 125/538 - (23%)
• Similarity: 183/538 - (34%)
• Gaps: 178/538 - (33%)

  Fly   109 CSSPNT--CSCNAGYG--GIDCH-PVCP--TVCGKNEFCDRPGVCSCQNGYKRTSPSDNCL---- 162
            |.:|.:  .:|.||:.  |.:|. .||.  :.|.:||.|.|||.|.|::||...:....|.
  Rat    46 CRTPGSQVLTCCAGWRQLGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFW 110

  Fly   163 -PVCEKECG-H-HSFCSE-PGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRC- 222
             |.|::.|. | |..|.: .|:|.|                :.......|...|  .| |:..|
  Rat   111 GPDCKERCSCHPHGQCEDVTGQCTC----------------HARRWGARCEHAC--QC-QHGTCH 156

  Fly   223 VRPGVCECENGYAGDDGGTNCRPVCSTCPENGLCLSP--GVCVCKPGYVMR--NDLCQPHCEKCS 283
            .|.|.|.||.|:    .|..|...| .|.....| .|  |.|:|..|:..|  |:.|..:...|.
  Rat   157 PRSGACRCEPGW----WGAQCASAC-YCSATSRC-DPQTGACLCHAGWWGRSCNNQCSCNSSPCE 215

  Fly   284 DNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPE-TCVCSIGYQMGPNQVCEPKC- 346
            ..:     .:|:|......:..|:.|      .|..|.|...: ||.|..||:   .:.|...|
  Rat   216 QQS-----GRCQCRERTFGARCDRYC------QCFRGRCHPVDGTCACDPGYR---GKYCREPCP 266

  Fly   347 ----SLNCVH--GKCTSPETC--------TCDPGYRFKDNSHHECDPIC-----DSGCSNGHCVA 392
                .|.|..  |:|...:.|        ||:||:     :..:||..|     ..||  ||...
  Rat   267 AGFYGLGCRRRCGQCKGQQPCTVVEGRCLTCEPGW-----NGTKCDQPCATGFYGEGC--GHRCP 324

  Fly   393 PNFCICHDGYQLNSTNPVTSMCQPICKGCQFGDCVAPNVCECNVGYENINGLCELQTTTDSYEYS 457
            |    |.||:   :.|.||..|                 ..||.|:  |...||.:.:..:|...
  Rat   325 P----CRDGH---ACNHVTGKC-----------------THCNAGW--IGDRCETKCSNGTYGED 363

  Fly   458 TTTV--ELQSSTVDPQ----LQTSTSEVPHSN--CTAGCMCWIEYDGMGTFNTAKCAKICVDPQD 514
            ...|  :..|...|.|    |.:.....||.|  |.||            .:...||:.|
  Rat   364 CAFVCSDCGSGHCDFQSGRCLCSPGVHGPHCNVTCPAG------------LHGVDCAQAC----- 411

  Fly   515 KPCLNLDNCQCDLSSGQLVCQEDSDMDYSGENSRYVCHILPEQGARSEAEVRIPDRTGSSNKWMI 579
                              .|.|:|....:|     .||:...|                 .|.::
  Rat   412 ------------------SCHEESCDPVTG-----ACHLETNQ-----------------RKGVM 436

  Fly   580 IVGSCAGMIIGVAATIIG 597
            ..|:...:::|:..:::|
  Rat   437 GAGALLTLLLGLLLSLLG 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NimC1	NP_001260453.1	None
Scarf2	XP_038944006.1	PHA03247	<683..837	CDD:223021