DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and Megf11

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_006511049.1 Gene:Megf11 / 214058 MGIID:1920951 Length:1138 Species:Mus musculus


Alignment Length:889 Identity:207/889 - (23%)
Similarity:278/889 - (31%) Gaps:342/889 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NDCSHPESVPYNRKVLKSKLVPFQQYSYFH-----GWVTKYRHQYVYEDETAYRTVM------RP 82
            |.|||.||  |...|.:|...||.|..|..     .|....||:..|  :||||..:      |.
Mouse    25 NVCSHWES--YAVTVQESYAHPFDQIYYTRCADILNWFKCTRHRISY--KTAYRRGLRTMYRRRS 85

  Fly    83 SCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPT-----------VCGK 136
            .||.||..:.:.|.|:|.::| .||.|.||:||.|..|:||.||...|.:           .|..
Mouse    86 QCCPGYYENGDFCIPLCTEEC-MHGRCVSPDTCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQN 149

  Fly   137 NEFCDR-PGVCSCQNGYKRTSPSDNCLP-----VCEKECG-HHSFCSEP--GKCECEPGYEKVGN 192
            ...|:. .|.|.|..|::.....:.|.|     .|:..|. ||....:|  |:|.|.|||..|..
Mouse   150 GALCNPITGACVCAPGFRGWRCEELCAPGTHGKGCQLLCQCHHGASCDPRTGECLCAPGYTGVYC 214

  Fly   193 GTVFPDGYKNNSNG-NCSPICPKDCGQNSRCVR-PGVCECENGYAG---------DDGGTNCRPV 246
            ..:.|.|    |:| :|...||  |.....|.. .|.|.|..|:.|         ...|.||...
Mouse   215 EELCPPG----SHGAHCELRCP--CQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQD 273

  Fly   247 CSTCPENGLC-LSPGVCVCKPGYVMRNDLCQPHCE------KCSDNAHC-------VAPNQCECF 297
            | .|...|.| ...|.|.|..||:  .|.||..|.      .||....|       .|...|||.
Mouse   274 C-PCHHGGQCDHVTGQCHCTAGYM--GDRCQEECPFGTFGFLCSQRCDCHNGGQCSPATGACECE 335

  Fly   298 PGYESSGADKKCVPK--------------------------------------CSKGCTNGF--- 321
            |||:.....::..|:                                      |::.|..|:   
Mouse   336 PGYKGPSCQERLCPEGLHGPGCTLPCPCDTENTISCHPVTGACTCQPGWSGHYCNESCPAGYYGN 400

  Fly   322 -CFAPET-------------CVCSIGYQMGPNQVCE---------PKCSLNC----------VHG 353
             |..|.|             |.|:.|: ||  :||.         |.||..|          |.|
Mouse   401 GCQLPCTCQNGADCHSITGSCTCAPGF-MG--EVCAVPCAAGTYGPNCSSVCSCSNGGTCSPVDG 462

  Fly   354 KCTSPE-------------------------------------TCTCDPGY-------------- 367
            .||..|                                     :|.|.||:              
Mouse   463 SCTCREGWQGLDCSLPCPSGTWGLNCNETCICANGAACSPFDGSCACTPGWLGDSCELPCPDGTF 527

  Fly   368 -----RFKDNSHHE-CDPI--------------CDSGCSNGHCVAPN---FCICHDGYQLNSTNP 409
                 ...|.||.: |||:              |||.|..|.. .||   .|.|.:|   .|.:|
Mouse   528 GLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRW-GPNCSVSCSCENG---GSCSP 588

  Fly   410 VTSMCQ-------PICKG-CQFG----DCVAP---------------NVCECNVGYENINGLCEL 447
            ....|:       |:|:. |..|    .|..|               .:|||..|:.  ..||. 
Mouse   589 EDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSRGPCHHISGICECLPGFS--GALCN- 650

  Fly   448 QTTTDSYEYSTTTVELQS-------STVDPQLQ--------TSTSEVP---------HS-NCTAG 487
            |.....: :.....:|.|       |.:|...|        ..:...|         |: :|..|
Mouse   651 QVCAGGH-FGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGKDCSQACPSGFWGSACFHTCSCHNG 714

  Fly   488 CMCWIEYDG--------MGTFNTAKCAKICVDPQDKPCLNLDNCQ----CDLSSGQLVCQEDSDM 540
            ..|..| ||        .|.|.|.:|.....   .|.|.::..||    ||..:|:..|:    .
Mouse   715 ASCSAE-DGACHCTPGWTGLFCTQRCPSAFF---GKDCGHICQCQNGASCDHITGKCTCR----T 771

  Fly   541 DYSGENSR---------YVCHILPE--------------------QGARSEAEVRIPDRTGSSNK 576
            .:||.:..         |.|..|.|                    :|.|.:....:.|......|
Mouse   772 GFSGRHCEQRCAPGTFGYGCQQLCECMNNATCDHVTGTCYCSPGFKGIRCDQAALMMDELNPYTK 836

  Fly   577 WMIIVGS---CAGMIIGV------AATIIGIKYYRRSTSRRNFE 611
            ....:|:   ..|.:.|:      ...::|:..:||   ||..|
Mouse   837 ISPALGAERHSVGAVTGIVLLLFLVVVLLGLFAWRR---RRQKE 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Megf11XP_006511049.1 EMI 25..92 CDD:400092 25/70 (36%)
EGF_CA 188..233 CDD:419698 18/50 (36%)
EGF_CA 274..319 CDD:419698 15/47 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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