DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and pqn-91

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_502844.1 Gene:pqn-91 / 190672 WormBaseID:WBGene00004171 Length:419 Species:Caenorhabditis elegans


Alignment Length:511 Identity:104/511 - (20%)
Similarity:151/511 - (29%) Gaps:218/511 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSDNCLPV 164
            ||.|.    |:|....||:           |.......::.     |||||    |:|...    
 Worm    26 RQSCG----CASQVQPSCS-----------CQQATQPQQYS-----CSCQN----TAPVQT---- 62

  Fly   165 CEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCE 229
                           .|.|....::|        .|:..:: .|:|.|.:.| ||.....|.:.|
 Worm    63 ---------------SCSCAQPVQQV--------TYQVQTS-QCAPACQQSC-QNQCQFAPSMNE 102

  Fly   230 CENGYAGDDGGTNCRPVCSTCPENGLCLSPGVCVCKPGYVMRNDLCQPHCEKCSDNAHCVAPNQC 294
            |:         ::|:..|.|........:|....|:|.       |.|.||:     .||||   
 Worm   103 CQ---------SSCQQTCQTSSCYTQIAAPAPVQCQPS-------CMPACEQ-----SCVAP--- 143

  Fly   295 ECFPGYESSGADKKCVPKCSKGCTNGFCFAPETCVCSIGYQMGPNQVCEPKCSLNCV-------- 351
                    :....:|||:|.:.||       :.||     |..|.|.|:|:|...||        
 Worm   144 --------APVTVQCVPQCQQKCT-------QQCV-----QAQPIQQCQPQCQQQCVQQCAPTVA 188

  Fly   352 ------------------------------------HGKCTSPETCTCD---------------- 364
                                                :.:||.|...||.                
 Worm   189 PQVINVNLGISAQCAPQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQ 253

  Fly   365 ---PGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLNSTNPVTSMCQ----------- 415
               |..:...|:..:..|:|...|: ..|..|:...|.   |..::...|..||           
 Worm   254 PSAPQCQQCQNTCQQYAPVCQQQCA-PQCTLPSAPACQ---QCQTSCQQTQQCQQQCIPQCQQPA 314

  Fly   416 -PICKGCQFGDCVAPNVCECNVGYENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTS---- 475
             |.|:.|| ..|.:|.|..              |..|...|.|.:    ||:...||.|.|    
 Worm   315 APQCQQCQ-SACQSPVVAP--------------QIVTVILEPSVS----QSAQCVPQCQQSCQQQ 360

  Fly   476 --TSEVPHSNCTAGCMCWIEYDGMGTFNTAKCAKICVDPQ--DKPCL--NLDNCQC 525
              ..:.|...|...|             |..|.:.|...|  ..|||  ::::|.|
 Worm   361 CIQQQQPMQQCAPAC-------------TQSCYQSCSTAQLVQMPCLTQSVNSCSC 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
pqn-91NP_502844.1 DUF1096 19..67 CDD:284022 16/83 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28786
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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