DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and C53B7.2

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_509154.2 Gene:C53B7.2 / 183744 WormBaseID:WBGene00016893 Length:169 Species:Caenorhabditis elegans


Alignment Length:228 Identity:53/228 - (23%)
Similarity:65/228 - (28%) Gaps:104/228 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DETAYRTVMRPSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGK 136
            |...::|..:.||     |..|...| |.|.||.  .|.|||              |.|...|  
 Worm    17 DSQYHQTTTQVSC-----GINEQYSP-CTQMCPP--TCESPN--------------PQCRVDC-- 57

  Fly   137 NEFCDRPGVCSCQNGYKRTSPSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYK 201
                              |.||..|||      ||....|.    :|.|.               
 Worm    58 ------------------TRPSCTCLP------GHVYSNSR----QCIPA--------------- 79

  Fly   202 NNSNGNCSPICPKDCGQNSRCVRPGVCECENGYAGDDGGTNCRPVCST----------------- 249
                .:|.......|..|:.| |||: .|.|||.|...|...|.|.|:                 
 Worm    80 ----NSCYQTQSLRCRMNNDC-RPGM-YCINGYCGAASGVYTRTVVSSSSLSSSSSGHRHHSHRS 138

  Fly   250 ---------CPENGLCLSPGVCVCKPGYVMRND 273
                     |....:|:. |:||    |..|:|
 Worm   139 QGECSLDVHCDHRKICID-GICV----YADRSD 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
C53B7.2NP_509154.2 TIL 29..82 CDD:460351 26/123 (21%)

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