DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and C53B7.2

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_509154.2 Gene:C53B7.2 / 183744 WormBaseID:WBGene00016893 Length:169 Species:Caenorhabditis elegans


Alignment Length:228 Identity:53/228 - (23%)
Similarity:65/228 - (28%) Gaps:104/228 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DETAYRTVMRPSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGK 136
            |...::|..:.||     |..|...| |.|.||.  .|.|||              |.|...|  
 Worm    17 DSQYHQTTTQVSC-----GINEQYSP-CTQMCPP--TCESPN--------------PQCRVDC-- 57

  Fly   137 NEFCDRPGVCSCQNGYKRTSPSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYK 201
                              |.||..|||      ||....|.    :|.|.               
 Worm    58 ------------------TRPSCTCLP------GHVYSNSR----QCIPA--------------- 79

  Fly   202 NNSNGNCSPICPKDCGQNSRCVRPGVCECENGYAGDDGGTNCRPVCST----------------- 249
                .:|.......|..|:.| |||: .|.|||.|...|...|.|.|:                 
 Worm    80 ----NSCYQTQSLRCRMNNDC-RPGM-YCINGYCGAASGVYTRTVVSSSSLSSSSSGHRHHSHRS 138

  Fly   250 ---------CPENGLCLSPGVCVCKPGYVMRND 273
                     |....:|:. |:||    |..|:|
 Worm   139 QGECSLDVHCDHRKICID-GICV----YADRSD 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
C53B7.2NP_509154.2 TIL 29..82 CDD:366828 26/123 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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