DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and abu-15

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_504382.1 Gene:abu-15 / 182136 WormBaseID:WBGene00004099 Length:388 Species:Caenorhabditis elegans


Alignment Length:491 Identity:103/491 - (20%)
Similarity:155/491 - (31%) Gaps:173/491 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSDNCLPV 164
            ::||.    |:.|....|:       |..|..|..           ||||     ::|.....|.
 Worm    25 KRQCG----CAQPQQSQCS-------CQQVQQTQS-----------CSCQ-----SAPVQQQSPS 62

  Fly   165 CEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCE 229
            |.        |::|.:.:                 .....:..|:|.|.:.|.|..: ..|.|.:
 Worm    63 CS--------CAQPQQTQ-----------------QVQVQSTQCAPACQQSCQQQCQ-ASPSVSQ 101

  Fly   230 CENGYAGDDGGTNCRPVCSTCPENGLCLSPGVCVCKPGY------------VMRNDLCQPHC-EK 281
            |:         ..|:..|.             ..|.|.|            |::...|||.| ::
 Worm   102 CQ---------PQCQQQCQ-------------AQCTPMYNPPTTTTTTQAPVVQYQQCQPVCQQQ 144

  Fly   282 CSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPETC-----VCSIGYQMGPNQV 341
            |...  ||...|    |.       .:|.|:|.:.| |..|.:|.|.     |..|..::...|.
 Worm   145 CQST--CVQQQQ----PA-------AQCQPQCQQQC-NVACDSPSTTTQAPQVIQIQLEIQQAQA 195

  Fly   342 -CEPKCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLN 405
             |:|:|...| ...|..            :....::|:|.|::.||:         ||....|..
 Worm   196 QCQPQCQQQC-QSSCVQ------------QQQQSNQCEPACNTQCSD---------ICQQTAQAT 238

  Fly   406 --------STNPVTSMCQPICKGC-QFGDCVAPNVCECNVGYENINGLCELQTTTDSYEYSTTTV 461
                    :.|..|.|..|..... |..:| ||   .|....:|   .|..|.|...|:...||.
 Worm   239 QQVYNQNMNQNTNTQMYNPYNTNTNQNANC-AP---ACQPACDN---SCTSQQTQPMYQPYDTTT 296

  Fly   462 ELQSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDGMGTFNTAKCAKICVDPQDKPCLNLDNCQCD 526
            |..:..:...||||.::  .|.|...|             ...|.:.||. |.:|.     .|| 
 Worm   297 EAPAQVIQIVLQTSVAQ--SSQCAPQC-------------EQSCQQQCVQ-QQQPA-----AQC- 339

  Fly   527 LSSGQLVCQED-SDMDYSGENSRYVCHILPEQGARS 561
                |..||.. |:...:.:.:...|...|:|.:.|
 Worm   340 ----QTACQSSCSNSCQAAQPATTACQQSPQQSSCS 371

Return to query results.
Submit another query.