DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and abu-15

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_504382.1 Gene:abu-15 / 182136 WormBaseID:WBGene00004099 Length:388 Species:Caenorhabditis elegans


Alignment Length:491 Identity:103/491 - (20%)
Similarity:155/491 - (31%) Gaps:173/491 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSDNCLPV 164
            ::||.    |:.|....|:       |..|..|..           ||||     ::|.....|.
 Worm    25 KRQCG----CAQPQQSQCS-------CQQVQQTQS-----------CSCQ-----SAPVQQQSPS 62

  Fly   165 CEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCE 229
            |.        |::|.:.:                 .....:..|:|.|.:.|.|..: ..|.|.:
 Worm    63 CS--------CAQPQQTQ-----------------QVQVQSTQCAPACQQSCQQQCQ-ASPSVSQ 101

  Fly   230 CENGYAGDDGGTNCRPVCSTCPENGLCLSPGVCVCKPGY------------VMRNDLCQPHC-EK 281
            |:         ..|:..|.             ..|.|.|            |::...|||.| ::
 Worm   102 CQ---------PQCQQQCQ-------------AQCTPMYNPPTTTTTTQAPVVQYQQCQPVCQQQ 144

  Fly   282 CSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPETC-----VCSIGYQMGPNQV 341
            |...  ||...|    |.       .:|.|:|.:.| |..|.:|.|.     |..|..::...|.
 Worm   145 CQST--CVQQQQ----PA-------AQCQPQCQQQC-NVACDSPSTTTQAPQVIQIQLEIQQAQA 195

  Fly   342 -CEPKCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLN 405
             |:|:|...| ...|..            :....::|:|.|::.||:         ||....|..
 Worm   196 QCQPQCQQQC-QSSCVQ------------QQQQSNQCEPACNTQCSD---------ICQQTAQAT 238

  Fly   406 --------STNPVTSMCQPICKGC-QFGDCVAPNVCECNVGYENINGLCELQTTTDSYEYSTTTV 461
                    :.|..|.|..|..... |..:| ||   .|....:|   .|..|.|...|:...||.
 Worm   239 QQVYNQNMNQNTNTQMYNPYNTNTNQNANC-AP---ACQPACDN---SCTSQQTQPMYQPYDTTT 296

  Fly   462 ELQSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDGMGTFNTAKCAKICVDPQDKPCLNLDNCQCD 526
            |..:..:...||||.::  .|.|...|             ...|.:.||. |.:|.     .|| 
 Worm   297 EAPAQVIQIVLQTSVAQ--SSQCAPQC-------------EQSCQQQCVQ-QQQPA-----AQC- 339

  Fly   527 LSSGQLVCQED-SDMDYSGENSRYVCHILPEQGARS 561
                |..||.. |:...:.:.:...|...|:|.:.|
 Worm   340 ----QTACQSSCSNSCQAAQPATTACQQSPQQSSCS 371



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28786
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.