DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and F56B3.2

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_499983.2 Gene:F56B3.2 / 176902 WormBaseID:WBGene00018928 Length:432 Species:Caenorhabditis elegans


Alignment Length:484 Identity:109/484 - (22%)
Similarity:154/484 - (31%) Gaps:167/484 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LVPFQQYSYFHGWVTKYRHQYVYEDETAYRTVMRPSCCEGYEGSVENCKPVCRQQCPQHGFCSSP 112
            ::|.:.:.:|.|.:..          ..|....:.|.|.|        |......|..:|.|.:.
 Worm     1 MLPIRNFIHFSGLILL----------MFYLVDAQFSPCNG--------KSALNGVCDINGDCENK 47

  Fly   113 NT------CSCNAGY-------GGI-DCHPV-------CPTVCGKNEFCDRPGVCSC-QNGYKRT 155
            .:      |.|:..|       |.: .|.|:       |.:.|.:..|| |.|.|.| |.|..|.
 Worm    48 GSICLRGKCRCHPHYTETRDEKGRLPKCAPLPAKIGARCSSKCREPLFC-RNGECQCVQRGTTRV 111

  Fly   156 SPSDNCLPVCE--KECGHHSFCSEP------GKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPIC 212
            | :..|:....  ..|..|..|:.|      .:|.|..|..::|:..|            .:..|
 Worm   112 S-NGECITTSRVGDRCSRHYDCTSPFSACVNSQCVCITGTIQMGSRCV------------AAANC 163

  Fly   213 P--KDCGQNSRCVR---PGVC--------ECENGY----AGDDGGTNCRPVCSTCPENGLCLSPG 260
            |  |..||:  |||   |.:.        .|..|.    ||:....:|.||  .||.|       
 Worm   164 PFGKLPGQS--CVRKSDPSLAFNIPSNQDNCPMGQVCITAGESQVGHCCPV--ICPLN------- 217

  Fly   261 VCVCKPGYVMRNDL---CQPHCE---KCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTN 319
                     ...|.   |.|...   ||..::|       .|:...:.|.:...|   |.:.|. 
 Worm   218 ---------TTTDTRYSCDPDAAPALKCPSDSH-------YCYFLSDGSFSQAAC---CRRPCN- 262

  Fly   320 GFCFAPETCVCSIGYQMGPNQV-----CEPKCSLNCVHGKCTSPETC------TCDPGY-RFKDN 372
                           .|.||.:     |.|:..||   ..|||...|      .|..|. :.:.|
 Worm   263 ---------------AMAPNALYVDYHCMPRGQLN---SACTSNAQCGGGEGMECMKGQCQCQQN 309

  Fly   373 SHHECDPICD------SGCSNGHCVAPNF---CICHDGYQLNSTNPVTSMCQPICKGCQFGDCVA 428
            .|...|.:.:      ..||. .|.:.|.   ..|.....|||...:...| |...||..|.|  
 Worm   310 FHPAVDVLTNPLKNPSQSCSR-DCESENLSKDTSCMKAVPLNSLCFIQKQC-PQNSGCYRGRC-- 370

  Fly   429 PNVCECNVGYENINGLC-EL---QTTTDS 453
              :|.|  |:...||.| |:   .|||.:
 Worm   371 --MCRC--GFAAKNGKCVEIPAPPTTTSA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
F56B3.2NP_499983.2 EB 111..157 CDD:279949 10/46 (22%)
EB 266..312 CDD:279949 13/48 (27%)
EB 332..383 CDD:279949 17/57 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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