DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and pqn-25

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_741140.1 Gene:pqn-25 / 175759 WormBaseID:WBGene00004114 Length:672 Species:Caenorhabditis elegans


Alignment Length:607 Identity:136/607 - (22%)
Similarity:194/607 - (31%) Gaps:214/607 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 CCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCS------CNAG--------YGGIDCHPVCPTV- 133
            |..||..:...|       ||.    ::.||||      |.||        |..::....|.:. 
 Worm   132 CASGYTCNNGAC-------CPN----TNSNTCSSNGNNGCLAGQTMVNGQCYNSVNIGSACQSTQ 185

  Fly   134 -CGKNEFCDRPGVCSCQNGYKR---------------------------TSPSDNCLPVCEKECG 170
             |.....|.. .:|.|.:||..                           .||..||  ....:|.
 Worm   186 QCLGGSQCQN-NICQCYSGYVNVNQQCVISNGLNCQLGTVSYNSQCITLASPGQNC--QTSSQCI 247

  Fly   171 HHSFCSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQ-----NSRCV------- 223
            .:|.|... .|.|...|..|              .|.|.||....|.|     |::||       
 Worm   248 DNSVCMNQ-MCTCNNNYRLV--------------YGYCVPITSSICQQTQTLVNNQCVLLSIVGE 297

  Fly   224 --------------RPGVCECEN------GYAGDDGGTNCRPVCSTCPENGLCLSP----GVC-- 262
                          ..|.|:|.|      ||......::|.  .:....||:|.:.    |.|  
 Worm   298 TCIANQQCVGGAMCNSGTCQCTNGATAMYGYCISSSSSSCN--SNQVSINGMCYNTVQVGGSCSF 360

  Fly   263 --VCKPGYVMRNDLC-QPHCE-KCSDNAHCVAPNQCECFPGYESSGADKKCV--PKC--SKGCTN 319
              .|....|..|::| ...|. .||.|..|:: |||.   .|.|.|:  :||  .:|  :..|.:
 Worm   361 SQQCLNNAVCTNNICVSTFCSVSCSTNQVCIS-NQCY---NYVSIGS--QCVGSQQCLSNSQCIS 419

  Fly   320 GFCFAPETCVCSIGY---------QMGPNQV---------------CE--PKCSLN--CVHGKCT 356
            ..|..|:....|.|.         |..||||               |:  .:|..|  |::..|.
 Worm   420 SICQCPQGTQQSNGVCTGNNNNNNQCQPNQVLINNQCYNTVSIGFQCQFPQQCLGNSQCMNSMCQ 484

  Fly   357 SPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLNSTNPVTSMCQPICKGC 421
            .|...|...||             |..| |||.|.:....|.:..|   :|..:...|| ..:.|
 Worm   485 CPTGSTNVNGY-------------CQGG-SNGQCNSNQVLINNQCY---NTVSIGFQCQ-FAQQC 531

  Fly   422 QFGDCVAPNVCECNVGYENINGLCE----LQTTTDSYEYST---TTVELQSSTVDPQLQTSTSEV 479
            ........::|:|..|..|:||.|:    .|..::...|:.   .||.:.|     |.|.:...:
 Worm   532 LGNSQCLNSICQCPSGSSNVNGYCQGGSNGQCNSNQVYYNNQCYNTVPIGS-----QCQITQQCL 591

  Fly   480 PHSNC-TAGCMCWIEYDGMGTFN-------TAKCAKIC-------VDPQDKPCLNLDNCQCDLSS 529
            .:|.| .:.|.|     ..||.|       ::..:.:|       :|..::|.    ||...   
 Worm   592 GNSQCMNSFCQC-----PSGTTNVNNFCTTSSSSSNLCSAGQTVQLDSSNQPI----NCLVS--- 644

  Fly   530 GQLVCQEDSDMDYSGENSRYVC 551
               .|..:|...||....||||
 Worm   645 ---TCPNNSFCQYSSSGQRYVC 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
pqn-25NP_741140.1 EB 160..211 CDD:460294 11/51 (22%)
EB 219..270 CDD:460294 12/67 (18%)
EB 278..329 CDD:460294 10/50 (20%)
EB 341..>376 CDD:460294 8/34 (24%)
EB 384..435 CDD:460294 18/56 (32%)
EB 450..496 CDD:460294 10/58 (17%)
EB 504..555 CDD:460294 13/54 (24%)
EB 563..614 CDD:460294 13/60 (22%)

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