DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and pqn-25

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_741140.1 Gene:pqn-25 / 175759 WormBaseID:WBGene00004114 Length:672 Species:Caenorhabditis elegans


Alignment Length:607 Identity:136/607 - (22%)
Similarity:194/607 - (31%) Gaps:214/607 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 CCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCS------CNAG--------YGGIDCHPVCPTV- 133
            |..||..:...|       ||.    ::.||||      |.||        |..::....|.:. 
 Worm   132 CASGYTCNNGAC-------CPN----TNSNTCSSNGNNGCLAGQTMVNGQCYNSVNIGSACQSTQ 185

  Fly   134 -CGKNEFCDRPGVCSCQNGYKR---------------------------TSPSDNCLPVCEKECG 170
             |.....|.. .:|.|.:||..                           .||..||  ....:|.
 Worm   186 QCLGGSQCQN-NICQCYSGYVNVNQQCVISNGLNCQLGTVSYNSQCITLASPGQNC--QTSSQCI 247

  Fly   171 HHSFCSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQ-----NSRCV------- 223
            .:|.|... .|.|...|..|              .|.|.||....|.|     |::||       
 Worm   248 DNSVCMNQ-MCTCNNNYRLV--------------YGYCVPITSSICQQTQTLVNNQCVLLSIVGE 297

  Fly   224 --------------RPGVCECEN------GYAGDDGGTNCRPVCSTCPENGLCLSP----GVC-- 262
                          ..|.|:|.|      ||......::|.  .:....||:|.:.    |.|  
 Worm   298 TCIANQQCVGGAMCNSGTCQCTNGATAMYGYCISSSSSSCN--SNQVSINGMCYNTVQVGGSCSF 360

  Fly   263 --VCKPGYVMRNDLC-QPHCE-KCSDNAHCVAPNQCECFPGYESSGADKKCV--PKC--SKGCTN 319
              .|....|..|::| ...|. .||.|..|:: |||.   .|.|.|:  :||  .:|  :..|.:
 Worm   361 SQQCLNNAVCTNNICVSTFCSVSCSTNQVCIS-NQCY---NYVSIGS--QCVGSQQCLSNSQCIS 419

  Fly   320 GFCFAPETCVCSIGY---------QMGPNQV---------------CE--PKCSLN--CVHGKCT 356
            ..|..|:....|.|.         |..||||               |:  .:|..|  |::..|.
 Worm   420 SICQCPQGTQQSNGVCTGNNNNNNQCQPNQVLINNQCYNTVSIGFQCQFPQQCLGNSQCMNSMCQ 484

  Fly   357 SPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLNSTNPVTSMCQPICKGC 421
            .|...|...||             |..| |||.|.:....|.:..|   :|..:...|| ..:.|
 Worm   485 CPTGSTNVNGY-------------CQGG-SNGQCNSNQVLINNQCY---NTVSIGFQCQ-FAQQC 531

  Fly   422 QFGDCVAPNVCECNVGYENINGLCE----LQTTTDSYEYST---TTVELQSSTVDPQLQTSTSEV 479
            ........::|:|..|..|:||.|:    .|..::...|:.   .||.:.|     |.|.:...:
 Worm   532 LGNSQCLNSICQCPSGSSNVNGYCQGGSNGQCNSNQVYYNNQCYNTVPIGS-----QCQITQQCL 591

  Fly   480 PHSNC-TAGCMCWIEYDGMGTFN-------TAKCAKIC-------VDPQDKPCLNLDNCQCDLSS 529
            .:|.| .:.|.|     ..||.|       ::..:.:|       :|..::|.    ||...   
 Worm   592 GNSQCMNSFCQC-----PSGTTNVNNFCTTSSSSSNLCSAGQTVQLDSSNQPI----NCLVS--- 644

  Fly   530 GQLVCQEDSDMDYSGENSRYVC 551
               .|..:|...||....||||
 Worm   645 ---TCPNNSFCQYSSSGQRYVC 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
pqn-25NP_741140.1 EB 160..211 CDD:279949 11/51 (22%)
EB 219..270 CDD:279949 12/67 (18%)
EB 278..329 CDD:279949 10/50 (20%)
EB 341..>376 CDD:279949 8/34 (24%)
EB 384..435 CDD:279949 18/56 (32%)
EB 450..496 CDD:279949 10/58 (17%)
EB 504..555 CDD:279949 13/54 (24%)
EB 563..614 CDD:279949 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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