DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and D1044.7

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_498177.1 Gene:D1044.7 / 175758 WormBaseID:WBGene00017032 Length:400 Species:Caenorhabditis elegans


Alignment Length:444 Identity:102/444 - (22%)
Similarity:142/444 - (31%) Gaps:137/444 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 ECEPGYEKVGNGTVFPDGYKNNSNG--NCSPICPKDCGQNSRCVRPG-VCECENGY--------A 235
            :|.||        :.|....||.|.  .|:|..|..|...|  .|.| :|...:.|        .
 Worm    18 QCPPG--------LIPLTSNNNFNQPLTCTPQDPCSCFSVS--ARYGAICHYSSNYNNYLCCHSQ 72

  Fly   236 GDDGGTNCRPVCS------TCPENGLCLSPGVCVCKPGYVMRNDLCQPHCEKCSDNAHCVAPNQC 294
            ....|||..|..|      ||..|..|.|        ||:..|..|.|     :.|::..:....
 Worm    73 NTQCGTNSSPQVSASGQVVTCFTNSQCAS--------GYICSNGACCP-----NTNSNTCSTTGT 124

  Fly   295 ECFPGYESSGA--------------DKKCV--PKCSKG---CTNGFCFAPETCVCSIGYQM---- 336
            .||.|..|.|.              .::|:  .:|...   |.|||....:.|.|.:|..:    
 Worm   125 PCFTGQISVGGQCFNSVNIGDRCQRSEQCLGGSQCQNNLCQCPNGFANVNQKCACQLGTVLFNSQ 189

  Fly   337 -----GPNQVCEPKCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFC 396
                 .|.|.|:  .|..|:.....:.:.|:|:..||.   ....|.|..:|.|.....:..|.|
 Worm   190 CITLASPGQNCQ--ISSQCIDNSVCNNQMCSCNGNYRL---VFGYCVPFTNSKCQQTQTLVNNQC 249

  Fly   397 I--------------CHDGYQLNS-----TNPVTSMCQPICKGCQFGDCVAP----NVCECNVGY 438
            :              |..|...||     ||..|:|         :|.|::.    |.|..|..|
 Worm   250 VLLSIVGETCIANQQCVGGAMCNSGTCRCTNGATAM---------YGYCISSQSTVNPCNSNQVY 305

  Fly   439 ENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDGMGTFNTA 503
              .||.|          |:|..:..|.......|..|..:.....||:           |:.|..
 Worm   306 --YNGQC----------YNTVNIGFQCQITQQCLGNSQCQNSFCQCTS-----------GSPNNG 347

  Fly   504 KC------AKICVDPQDKPCLNLDNCQCDLSSGQLVCQEDSDMDYSGENSRYVC 551
            .|      :.:|...|   .:.|||....::....||...|...||....||||
 Worm   348 ICPTSPNTSNLCSSGQ---TVQLDNNNQPINCLVTVCPNTSFCQYSSSGQRYVC 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
D1044.7NP_498177.1 EB 126..177 CDD:460294 11/50 (22%)
EB 179..230 CDD:460294 11/55 (20%)
EB 238..289 CDD:460294 12/59 (20%)
EB 299..349 CDD:460294 15/72 (21%)

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