DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and F07H5.8

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_495874.3 Gene:F07H5.8 / 174407 WormBaseID:WBGene00008559 Length:835 Species:Caenorhabditis elegans


Alignment Length:539 Identity:116/539 - (21%)
Similarity:171/539 - (31%) Gaps:163/539 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 YRTVMRPSCCEGYEGSVENCKPVCRQQCPQ--HGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNE 138
            |.|...|..|      |..|:|.|...|..  ....|.|..|.       .:|.|.|.|.|...:
 Worm   369 YTTTPAPLHC------VSQCQPACLPSCTDTFTTTISLPKQCV-------PECQPACETKCIVAQ 420

  Fly   139 FCDRPGVCSCQNGYKRTS-------PSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVF 196
            .     |...:|.|::..       |..:|:|.|:..|......::|.        ..|....:.
 Worm   421 I-----VLKIKNSYQQPQQLSQQYIPQSSCVPQCQPACTQECVAAQPN--------FSVQINMID 472

  Fly   197 PDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCECE--NGYAGDDGGTNCRPVCS-TCPENGLCL- 257
            .....:.|:..|.|.|...|.|  :|::....:.:  |.........||.|.|. ||.::  |: 
 Worm   473 ETPSTSTSSPQCIPQCQPSCDQ--QCIQTYKIQVQQMNSQQKQQRQYNCVPACQPTCEQS--CIQ 533

  Fly   258 SPGVCVCKPGYVMRN------DLCQPHCEKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKG 316
            |......:..|...|      ..|||.||..     ||.....:     .:....|.|||:|...
 Worm   534 SQYQVTIQQSYSKGNQGNSCPSACQPACEPL-----CVQQITVQ-----TTVPITKTCVPQCQPA 588

  Fly   317 CTNGFCFAPETCVCSI-----GYQMGPNQVCEPKCSLNCVH------GKCTSPETCTCDPGYRFK 370
            ||........|...||     .....|.  |:|.|...|:.      ...|.|.|.:|.|     
 Worm   589 CTQECVQQATTYTISIPMTTAAPSCAPQ--CQPACDPQCISFTLKLPVMTTPPPTPSCQP----- 646

  Fly   371 DNSHHECDPICDSGCSNGHCVAPNFCI-CHDGYQLNSTNPVTSMCQPIC-----KGCQFGDCVAP 429
                 :|.|.|...|...:    .|.| .:|    .|:......|||:|     :..|| :.|.|
 Worm   647 -----QCQPACQPSCMETY----TFTIPMND----QSSKQCAPACQPVCDSKCIQNYQF-EIVIP 697

  Fly   430 ---NVCECNVGYENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCTAGCMCW 491
               |.|              :...|.|.:  |:.|:..|.:| ||..|:.::    :|.:.|:..
 Worm   698 QADNNC--------------MPACTQSCQ--TSCVQQNSQSV-PQCSTACTD----SCRSSCVEI 741

  Fly   492 IEYDGMGTFN---------------TAKCAKICVDP--------------------------QDK 515
            ::.....||.               ..:||..|||.                          |.:
 Worm   742 VKESAEPTFKLEIVLKKPMEETVTCAPQCANQCVDQCKTQLLTQIEFCLPACQNACQQNCPLQVE 806

  Fly   516 PCLNLDNCQCDLSSGQLVC 534
            ||. :...||:.|:|..:|
 Worm   807 PCA-MSGSQCNCSTGFSLC 824



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I3394
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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