DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Dkk3

DIOPT Version :9

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_612528.2 Gene:Dkk3 / 171548 RGDID:621846 Length:348 Species:Rattus norvegicus


Alignment Length:240 Identity:53/240 - (22%)
Similarity:68/240 - (28%) Gaps:88/240 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YEDETAYRTVMRPSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVC 134
            |.:||...|.|..:....:    .....:...|..|..|..:..| |...|.|......:....|
  Rat    94 YHNETNTETRMENNTAHVH----REVHKITNNQSGQTVFSETVIT-SVEDGEGKKSHECIIDEDC 153

  Fly   135 GKNEFCDRPGVCSCQNGYKRTSPSDNCLPVCEKE--CGHHSFCSEPGKC---ECEPGYEKVGNGT 194
            |...:|.       .:.:|.|     |.|..:::  |...|.|.....|   .|.....|..|||
  Rat   154 GPTRYCQ-------FSSFKYT-----CQPCRDQQMLCTRDSECCGDQLCAWGHCTQKATKGSNGT 206

  Fly   195 VFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCECENGYAGDDGGTNCR-------PVCSTCPE 252
                            ||     .|.|..:||:|              |.       |||:..|.
  Rat   207 ----------------IC-----DNQRDCQPGLC--------------CAFQRGLLFPVCTPLPV 236

  Fly   253 NG-LCLSP---------------GV---CVCKPGYVMRNDLCQPH 278
            .| ||..|               |.   |.|..|.     |||||
  Rat   237 EGELCHDPTSQMLDLITWELEPEGALDRCPCASGL-----LCQPH 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Dkk3NP_612528.2 Dickkopf_N 147..196 CDD:282549 11/60 (18%)
Prokineticin <208..273 CDD:148298 19/88 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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