DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB5 and Tnfaip6

DIOPT Version :10

Sequence 1:NP_609692.3 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_445834.1 Gene:Tnfaip6 / 84397 RGDID:621359 Length:275 Species:Rattus norvegicus


Alignment Length:133 Identity:28/133 - (21%)
Similarity:47/133 - (35%) Gaps:44/133 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 CQCDPG----YK-LDETRRFCRPICSSGCGSSPRHNCTEPEICGCSKGYQLTDDGCQPVCEPDCG 254
            |:.:.|    || |:..|:....:|::|..:..|            .||.:...|      |:||
  Rat    58 CEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR------------VGYPIVKPG------PNCG 104

  Fly   255 IG--GLCKDNNQCDCAPGYNLR-------DGVCQADCYQKCNNGVCVSRNRCLCDPGY-TYHEQS 309
            .|  |:.          .|.:|       |..|.....::| .||.....|....||: ..::.:
  Rat   105 FGKTGII----------DYGIRLNRSERWDAYCYNPNAKEC-GGVFTDPKRIFKSPGFPNEYDDN 158

  Fly   310 TMC 312
            .:|
  Rat   159 QVC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_609692.3 None
Tnfaip6NP_445834.1 Link_domain_TSG_6_like 36..128 CDD:239592 20/97 (21%)
CUB 135..244 CDD:395345 7/28 (25%)

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